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Simple sequence repeat (SSR)
>UN06555
GGAAGGAAGCGAGTGACGACGTCTCTGTCTCTAGGTCTCTTGGCTTTTCCTCCGTCACAGTCACCGTAGAACATTGTGAATGGCGCCTAGAGGA
AGGAAAAAGAAGGCTGGAATGATGCGAGAGGATGCAGCACGAGATGCCATTAGAGCTTTTGGGTTTGCGGAGCGTCTTATCAATGTGTCTATCA
AGGAATTGCTTGAGGTGTATGGTGCGGAGGGTTGGTTTCTGATCGAAGAGTGTAGTTACTTGGTGCTGTTAAACAAATGCCTTGAGAAGTCAGC
TGAACAAGGCCCAAATTTGCCTGAAGATAGGGTAGAAGAGAGGGCTGAGGAGGAGGAACAAAACGATGAGATGATGGCTGAGGCAGAGAAAGAC
CAAAACGATGAGATGGTGGCTGAGGAGGCAGAACCAGAACAAAACCATGAGATGATGGTTGAGGCAGAGCAAGAACACACGCCTCAGCAAGAAG
AAGAAAAGGAGCAAGAAGAGCAGCTAAGAGACCATGTCGGTAGCAACTCAACGTCTCTGTTGGGGTGTGTTGCCGAGACAGGTACAAAGGCATG
TCAGACTGAAGCTTTATCAACCACTAGCGAGACAGACATCTTGGACTCATCACCAGCAGCAGGAGAAGCATCAGTGATCGATTACACATCACCA
CCATCAGCGTTTCCACCAGCATGTTTTGCACAACATCCTTCTGCAGGTGCCAATCTTTCCGGACGGGGTGGATGGATAAGTGATTCGGCTGAGG
ATGAGGATCCAGATGATGGTGATGATGATGGTGATGAGATGATTCAGCTGACTCCAGAACCGCTGTGTGAAGAGCTTGAAGAGCTGATCAAGGA
GATACGTGGAGAGAAGAAGAAGAAGAAGAGGACCAGGTGGGAAGACTAAGCTGAGCTCATGAGCTCCTGTAAGCAGCGTCAAAGTTAAGTAAGC
TAAGAAGTAGAGTGAAAGAGAGTAAGTAGTATTAGAACAAGTAAGGAGGAGTCGAGAGCAGCTCCTGTAAGTATCGCTTAAGTTAAGTAAGCTA
AGAAGTAGAGTGAGAGACTAATAAGTAGTATTGGTTTAAAACTTGATATGGTGATGTATATTTTGTTATTTAAATCAGTTGTATAATCATTACT
CTGTGCACAAACTTAATCTAAGTAAAATAACCAGTTT |
Primers for UN06555 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAGTGATTCGGCTGAGGATG |
60.218 |
20 |
ACAGGAGCTGCTCTCGACTC |
59.89 |
20 |
273 |
736 |
1008 |
2 |
CGCTGTGTGAAGAGCTTGAA |
60.324 |
20 |
ACAGGAGCTGCTCTCGACTC |
59.89 |
20 |
196 |
813 |
1008 |
3 |
TGAGGATCCAGATGATGGTG |
59.425 |
20 |
ACAGGAGCTGCTCTCGACTC |
59.89 |
20 |
255 |
754 |
1008 |
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