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Simple sequence repeat (SSR)
>UN80460
GGGCCACACATGTTCTCCCTCCACATAAAAACACCAATTGACGTTTTGCAGGGACCATAGTGTAAAGAGAGAGAGAGAGGCTCTTTATTATATT
ACTTCAACATGGATCAAATGAAGATTCATTTCATGAGTTGTCGCTGTGATTGTGAAGAGTTTGAAAACAGAGGAGATCAACATTATTCAAGCAA
GAAGAAAGAGAGAAGAAGGGCCAACAAGAAAGGAAAAGAAAAGAAAAGCTGAATTGTCAGTTTATTCTCTGCAAACGTGCGGCCTAAGTAACAA
CAACACATGTATACTCTCTGTTCCTGACAAGAACTTCTCTTTCTCTGTTTTTTTTTTTAAAAAGAGACAAAGCCTCACGCTTCTGTCTCGTTTC
TTCCTTTGTTACTCTCTCTGTTTAACACAAAACGAATGTCTTTTCAGGTCGAACTACGGAGTGAAAGAGCTCACATGGGAAAATGGGCAACTAA
CGGTCCATGGTCTAGGCCAAGGAGTCGAACCAACGACCTCAGCTAATCTTTTATGGACCCAAGCTCTCAACGGATGTGAGACTTTAGAGTCTGT
GGTCCATCAGGCGGCTCTGCAGCAGCAGAGCAAGAATGGACGGGACCACAACAACTCCGAGAGCAAGGACGGATCCTGTTCAAGAAAACGCGGT
TACCCTCAAGAAATGGACTGCTGGTTCTCTCCTCAGAAGAGAGCCATAGAGTTGGTCACAGCGTGACTGCAAGTGC |
Primers for UN80460 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACGTTTTGCAGGGACCATAG |
59.993 |
20 |
CGCACGTTTGCAGAGAATAA |
60.014 |
20 |
229 |
41 |
269 |
2 |
AATTGACGTTTTGCAGGGAC |
59.978 |
20 |
CGCACGTTTGCAGAGAATAA |
60.014 |
20 |
234 |
36 |
269 |
3 |
CACCAATTGACGTTTTGCAG |
60.149 |
20 |
CGCACGTTTGCAGAGAATAA |
60.014 |
20 |
238 |
32 |
269 |
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