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Simple sequence repeat (SSR)
>UN80488
GGGATCTAAAGTTGGGTTTGCGATTTCAATTTTGGAGGAACCCTAGCTTCTTCGTTTCCGTTTCCCCTCCCCCTCCAAATCTGATCTGTCCTTG
CAATCGGATTTGAATTCAGCTAATCCTAGTCTTGAATTGATCATGGCGTCGAAGAAGAAGCACTCTGAAGGAATCGCGTTACTATCCGATTACA
GTGACGAGGATGACGAAGAGATGGAAGACGCCGAGGAAGAAGAGCAGAGAAACAAGGAAGAAGTGGAACGAACTGGAGAGGGTGGTGGTCAGCC
AGAAGAAGAAGAAGCTAACTTTATGGACGAGGAGAAAGAGAGAGGAGGAGGAGGAGAAGATTCCAGAACGCCTGGTGGACCTTCAAGCGCTCAC
GCCACCCCTCGTTCACTCGACAACGACGACGAATCATTGAGACCTGATCGGAGTAGCAGTCCAATGAATTTTGAGTCTAGGGTTGGGAATGGTG
AGGATACGTCAGGGGAAAGTACTGATACGTTATTGGATCAGTTCCTTCCTCCACGTCCCAGAGAGAAGTGCTCCGAGGAGCTGCAAAGGAAAAT
AGATAAGTTTCTGAGCTTGAAGAAGATGGGGGAAGAGTTTTAATAATGAAGTTCGGAATAGAAAGGAATACAGGAATCCTGACTTCTTGTTACA
TGCTGTGAGTTATCAAGATATTGACCAGACTGGTTCTTGCTTCAGTAAAGACGTGTTTGACCCCAATGGATATGACCCTAGTGACTTCTGTGAT
GCATAGACTTGACATGAAGCATG |
Primers for UN80488 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GACGAAGAGATGGAAGACGC |
59.957 |
20 |
ACGTATCCTCACCATTCCCA |
60.195 |
20 |
280 |
200 |
479 |
2 |
CCGAGGAAGAAGAGCAGAGA |
59.82 |
20 |
TTCCCCTGACGTATCCTCAC |
59.927 |
20 |
269 |
219 |
487 |
3 |
GACGAAGAGATGGAAGACGC |
59.957 |
20 |
TCACCATTCCCAACCCTAGA |
60.309 |
20 |
272 |
200 |
471 |
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