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Simple sequence repeat (SSR)
>UN80495
TTTTTAGCTTTCGTTCCTTCTCTTGCTCAGATCAAAGAACTCTCTCTCTCTCTCCTTCTCTGCCATCTTCTGCGTTCTCTTCTCTGCCAAAGAC
AGAGAGAGTAAATATTCATTTAAAGAGAAAAAGAGGAACAAGTGTAACTTAAATCAGTTGTGGTCTTTGTTTGCTTCTGATTTGTTCTCACCTT
CTTCTTCTTTAAAAGAGAAAAACACATCTAGTAGAGGCAAATCATAGAGAAAGCAAAAATGTCGGCGGGAAAAGAAGCAATAGTAGCTAGCGGA
AATGACCACGACGGAGATCAGAATAACGGTAACCACACCGGAAAAACCGAAGAATACGACCCCTCCACCGGTTCTGCACTAAGCAACTTTCTCT
GGCACGGTGGCTCTGTCTGGGACGCTTGGTTCAGCTGCGCATCTAACCAGGTGGCGCAAGTGCTTCTGACACTACCGTACTCGTTCAGTCAACT
AGGGATGTTATCAGGAATAGTACTTCAGATCTTTTACGGCTTACTCGGAAGCTGGACTGCTTACCTCATCAGTGTTCTCTACGTTGAGTATCGA
GCTCGTAAGGAGAAAGAAGGCAAAAACTTCAAAAACCACGTTATTCAGTGGTTCGAAGTACTCGATGGGTTACTCGGCACATACTGGAAAGCAG
TAGGCCTCGCATTTAACTGCACTTTCCTCTTGTTTGGATCTGTAATCCAACTCATTGCTTGTGCCAGTACATTTATTACATAAACGATCACTTG
GACAGAGACAT |
Primers for UN80495 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCTTTCGTTCCTTCTCTTGC |
59.198 |
20 |
GCCGACATTTTTGCTTTCTC |
59.829 |
20 |
248 |
7 |
254 |
2 |
TTTCGTTCCTTCTCTTGCTCA |
60.118 |
21 |
GCCGACATTTTTGCTTTCTC |
59.829 |
20 |
246 |
9 |
254 |
3 |
GCTTTCGTTCCTTCTCTTGCT |
60.144 |
21 |
GCCGACATTTTTGCTTTCTC |
59.829 |
20 |
248 |
7 |
254 |
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