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Simple sequence repeat (SSR)
>UN80555
GGGCATTGAAAAGAAAAGAGTTGACCAAAAAAAAAAGAGTGAAGAAGACACAGTCTCTTCACTGTAGTTGGGTTCGTTGAAGATCTTCTTCCTC
TTCAAGGGAACAGTGTCGGAATCCATTGCTATGTCTCTTCATTTCCAGCTTTTTCCATCTCGGTAAAAAGCAAAAAGAAATTCGCGACGACATT
GGAGTTACAGTTAGTTATACTCCGCCATAGCAAATCTAGCTGCAATGAGGATACTTACTCGATTGGACATGCGCAGATTGCTGTCGGCCATCAT
CGTTACAGTTGCTTTAGTTGTTCTACTTGTTCTCTGTTTCGAGATGAATCACTCTAGTGATGATGATGATGAGTATGAAGAGGAGGAGACAAGA
AACGATGATTCTTCTAGAGAAAATAATGTTGTTGCAATCAGCAATGTAAAATTAGAGCTTAATGTATCATTGGGGAAACCTGAAATGGCGGTTG
AAAGTTCCGTTTTGGTCAAAAGTAGTGATAGTAGACAAAGTAATGCTTTGTCTATTTTGAGAAGACAGAAGCAAGTGGCTGCCACAGTTTCCAT
ATCTCAGATGAACTCATTGCTGATCCAAACTCGTCCTTCTTCTCATTCCCCTAAGCCTCGTTGGTCATCTGCTCGAGACTCTGAAATGCTCTCT
GCCAAATCCCAAATTGAGAAAGCTTCTGTTGTCCATGATTCTCTTGGACTTGATGCTTCCATTTATAGAAATATCTCCAAGTTTCTA |
Primers for UN80555 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCCGCCATAGCAAATCTAGC |
60.331 |
20 |
ACTTTCAACCGCCATTTCAG |
60.11 |
20 |
267 |
209 |
475 |
2 |
TCCGCCATAGCAAATCTAGC |
60.331 |
20 |
CATTTCAGGTTTCCCCAATG |
60.162 |
20 |
255 |
209 |
463 |
3 |
TCCGCCATAGCAAATCTAGC |
60.331 |
20 |
GAACTTTCAACCGCCATTTC |
59.551 |
20 |
269 |
209 |
477 |
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