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Simple sequence repeat (SSR)
>UN00652
GGTCTAACATGGTCTAAGATTTTATACATAAGAAGTGATAGGTTACTACAAAGAAAACAAATGATGAAATATACAAACCCTCTCCAATCAATAC
CAACCCACATTCAAGTGACTGGGTTGAAAAGAAACAAAAGAACATGAACATAAACAACCCCAAGCCTCGTCAACTACCAAAGCACACAACCCCT
CTCTCTCTCTCTCACATCCATGAAATGGAGTGTTAACAAATGAAAAAGGCAAAGAAGATGAACTATGAACCTCAATAATGCAATTTCCTCATAT
ACAGACAGAGATTCTATCTTCCCATGTACTCCGTATTCCTCAAGTACAGTAGTTTCCTCGATTGCGCTGGAGGAGCTAATCCTGGGATGTCCCT
AATGTCCTTGTTGTTCGGGTGTACGATCTGAATATAGTTTAACAACAACATACAAACAAAAAGTTACAACTTTCCAATGAACAATCACAACTTT
CATTGGAATGAGCAATGTACCTTCACTACGATAATGGCTATCACACCGCATACAATGAGAAACAGGAACATCATTATGCATTTATCAGTAGCCA
CCTGTCTCCCTATCTCTTTCACAAGCTGGGATGCTTTCTTGATAGAGAACTGAATCGTGTCTAAGTGGTTCACAACGCGTCCCATTTGATCTGT
CTGTCCCTTTAAATTAGCTGCAGTTTGAGTTCCAACTTCAATTGTTTGTTCTACAACCTGTTTTGAGCGCTCAATGGCCTGATCAGTCTCATCC
ATTCTTTTCATTCCAGCATCAACAAGCTCCTGGTTGACATAGCTGAAGCCACTTGAACGTTTTCGTCAGCAGTAGGTTCGGCGCTGGGTCCAGC
ACCCATATCAAAAAGTTCAATCTTCTTGTTGCCAAGGGTACTCATATACGTTTTTCTTAGTGCAACATAAGAATTGAGTTCCTTAATCATAGAT
TGTTTCTCATCATTCAATTGCTTATTTACTTCGGGAGGATTTGAAGCTTCCTCGTCCTTGAGTTCACGGTCAAAATCCTTTACCAACCTTTTAC
AGTCTCTCATCTTATCAGTGTGTTCCTCGAGTTGCTTGCTTTGTCTAGTTGAATCCTTCATCTTATCCAACCTCTGGAATCCATTCCTGCAATA
ACAGAACAACCATCAACAATCTCTTAAATCGAAGTTATAAGAAAGAGGAGAAAAAGCATTACGCGAGGGCTCGGAAATGGTCACGGATTTCGCC
ATGGATCTGCTCCAATTGAGGGCTCATCGGGATATTTGAAGCCATCTCGCCGGAGATATTCACAACTCCGACGATTAATCAAATCAGAACCCTA
AAGAGTACTTAAACACACACAGAAACAACAAAAGCCCCCAAAACGATAAAAACCTTAGCTTTTGAGGATTAACTCAAGTTAAAGAGGCTTCTCC
AGAAAACGGAAGGAAATTCAAATTAATATCC |
Primers for UN00652 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GCCTCGTCAACTACCAAAGC |
59.882 |
20 |
TCAGATCGTACACCCGAACA |
60.112 |
20 |
250 |
158 |
407 |
2 |
GCCTCGTCAACTACCAAAGC |
59.882 |
20 |
AGGGACATCCCAGGATTAGC |
60.293 |
20 |
219 |
158 |
376 |
3 |
GCCTCGTCAACTACCAAAGC |
59.882 |
20 |
TCGTACACCCGAACAACAAG |
59.609 |
20 |
245 |
158 |
402 |
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