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Simple sequence repeat (SSR)
>UN80700
GCAAAATCCCATTTTAATTTCAATTTCAATTTCTAATTTTTTTTTTCATTTTTTAGGCTCAAAGATTCTGTCTTTAGGGTTGAATTGGGTTTCT
GTTTATATCTGATTGAAAGTTAAGAAAGATTGTAGCTTTACGTTTACTTTAGATGACAAAAGACTTTTCTTTTTTTCTTTCTCAAATTTCAGGT
TCTTATCTAGATTCGGGAGACCTTGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGTTGAAGTGGATTACCCATGTCCGTTTTGCTCCG
ATGATTATGATTTAGTCGAGTTGTGTCACCATATCGCCGAAGAGCATCAGCTTGAAGCTACCTATGGGGTATGTCATCCTCTTTTCTCTCAATG
TTGTTTACTATTAGACATTTAAGTTTAGATATGGATTGAAAAGGTTCATATACTTGCTTTAGGATTCTGAGAAAATGACCCCTCTGTCCTAGTT
GAGTAGCAGTATTTAGATTGATGCCTTGGAATCAAATTGAAAATTGGGAAATGATTTCGAATGAGAACAATAGCACTTGATCTTCGGCTACTCT
TTTGAGTTGACAAAACTCACCATTAGAAGCTTTTGA |
Primers for UN80700 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GGGTTGAATTGGGTTTCTGTT |
60.082 |
21 |
GCAAAACGGACATGGGTAAT |
59.691 |
20 |
202 |
77 |
278 |
2 |
GGGTTGAATTGGGTTTCTGTT |
60.082 |
21 |
CGGACATGGGTAATCCACTT |
59.67 |
20 |
196 |
77 |
272 |
3 |
AGGGTTGAATTGGGTTTCTG |
58.884 |
20 |
GCAAAACGGACATGGGTAAT |
59.691 |
20 |
203 |
76 |
278 |
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