Simple sequence repeat (SSR)
>UN81000
TATAACCGATAAAATACCGTGTGGAATTGCGGAATTAGTCCACAGATTTATGCAGAGGGTTACGTCAACATAGGCTGTACTTGATAAAACAAAC
GCACATAAAACATTATATAAATATAAGGATGGGCTTTTGAAGTTTCAAGTCCAGCAGCCCCATAATCCAAATGATTCACCTTGCACAAAGACGT
CAGCGAAACAGCCCGTGTCATTACCACTGCCGTTGTTGTTGTTGTTGTTGTCTTGCCCGGAATGGTGGTGGATGGGTACAATGCTTGGGAAGTA
AGAGTCGCAGCTGTCTCTTAGTTGATGAGGTGCGTCTTCGTCTAGTACCGCACTCCCTGAACTTAACCGGTCCTCTGTTTTGATTGCCGGGTTC
ATATTCACCGGATCGAGCTGGTTTGGTTCTGGTACCTGACCAGTAGGTGTCTCTTCTTTGGCTTGGACCTTGCCGGCGAGGGAAGTCACCTGGG
ATCTGAGGAGATGGTTGTCCT |
Primers for UN81000 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAACAGCCCGTGTCATTACC |
59.859 |
20 |
GCGGTACTAGACGAAGACGC |
60.044 |
20 |
140 |
194 |
333 |
| 2 |
GGAATTGCGGAATTAGTCCA |
59.901 |
20 |
GTACCCATCCACCACCATTC |
59.91 |
20 |
245 |
23 |
267 |
| 3 |
AAACAGCCCGTGTCATTACC |
59.859 |
20 |
AGCTCGATCCGGTGAATATG |
60.059 |
20 |
202 |
194 |
395 |
|
|
