|
Simple sequence repeat (SSR)
>UN06650
GACAAAAGAGACATGAATTGACCAACAAAAACAAATATAAATTGTTTTGACAAATAAGACGCATGCGGCATGCTCTTTAACAGAGATTGACTCA
GACTCGAGCAATTAAAAAAAAAAAACGATTTCCAAAACCCCTCTTAACCAATATCCCACAACATTCGGCAGAGAAAAGAGGGTGACCCGCAAAT
GTTTTTTTGATCCTTTACTCAAACCAATAATACGACCAGAGAGAGAGAGAAGAGAGACGAACGAGTATTAATGATGAAAACGGTTTAATACTAC
TATGCGACCATGAGCCTTGCAATCATCCCTTGAGTCCAGCGTGCAGTGTCCTTGAGATCTTCATCCTCTGAGTCGAGACATTCATTGAGGAACT
CCCCGCAGAAGGTGAAGTTGCTGAACAAAGGCTTCGTCTTCTCTCCAACAACATCCGCAAGATCACCCAAAGCTGCCACCGCTGCTTTCGTCAC
GCTCTCATCCCTGAGGGAATCTTTGGAAACAAGTTCAACAAACTGCAAGAGATGTTGAGCGTAGGGGACCATGAGCTCAGCCTTGGCGTCCTTG
AACCCTTGTAGTATCCCAGAGTAAGCCTCAAAGATGCTTCTCCTGAGTTGGTTTCCGTAATCCATAAGCTCCTCGTCGAGGGTGTCCATCTGAG
CACATACGTGAGCAGCCCCTTGCATGATCTGAATAGCTGTAGCCACATACCTCTCAAAATGCCCACCAATCGCCAGAGCAATGTCTCCAAAACA
TGAGAATATTGGAGGTTCACCGACCTGTGGAGTGCTTCGCTTTGAAGGTTCTGGATTAGGAGAGACATGATCTGATCACAGAACGGTGGGATTT
TGTCATCCAGTGCACGGCAAATGTCACCAACCACTCCTACGGTGATCGAGCAGACTTGGTACTCCTCGAAGTTCTGCAGCCCAGTCTGGAGATA
TTTGAAGAGCTCAGGCATGTATTTTGCAAACTCAGATCCAGTCGCATAGGCAAGAGCACCGATTGCAAGCATTGCTTCTTCATGAACGCTTGAA
CTGTGGCATCCAAACACTCTGAGGAACAGCATCATGATATGATCTGCGTTCTGCATTATGATGGGTTTCGTCTCATCCTTGCTACTCAGCTTCT
GGATTATGACCTGGATGACACCACAGAGAGAAGCCTGGAGTTCCGCTTGCTTCTCACGGTCCTCAGTTGATACTACCTGGAGATCTATTGTCTG
ACCTAATTTCCCCATGATGACAGGGAGGAGCTGCCCTATGATGCCTGCGGCCTCTAAAAGGTTGGAACAACGGACAACCTCGTTCAAGGTTTCA
TATGAAGCAGATCTTAGCTTAGACTCTGCCCCATCTGTACGCTCAGCAGTTGCAAGCAGATGCTGGATGATTTCTGTAAGATAGGGAGAGAGAA
GAGATGAACTTGCTCCAC |
Primers for UN06650 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAAACGATTTCCAAAACCCC |
60.034 |
20 |
AAGGCTCATGGTCGCATAGT |
59.723 |
20 |
185 |
116 |
300 |
2 |
CATTCGGCAGAGAAAAGAGG |
59.948 |
20 |
AAGGCTCATGGTCGCATAGT |
59.723 |
20 |
145 |
156 |
300 |
3 |
CACAACATTCGGCAGAGAAA |
59.84 |
20 |
AAGGCTCATGGTCGCATAGT |
59.723 |
20 |
150 |
151 |
300 |
|
|