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Simple sequence repeat (SSR)
>UN81028
GAGAAACATAATTACTACTAAAATTAACATTTTCGGAAAATATAATAAGGGAAATTTCAAATTGTTTTCACAAGGTTCGAAAGTTTTTTTAACA
AGCCAGCCCATATATGATACTTGCCCATTTCAAAAAAAACCAAGAACAGAGAGTTAATGTTTTTTTTTTTTCATGTTGTCACCTCTGTTACTTA
CGCAAAACGCATCGTTCGTAAAGCTGGACCAACACGCTCTTTCTAGCGTTCTTCAACCCAACCAACTCAGCTCCAAACCCGTGTTTCAGTATCT
CATCTCTCAGCTTCTTCATCGTGTATTTCGAATGATCCATGCCTGTGGACGAAAACGACGCTCCTCCACCTCCAGTGCTGCTCGTGCATCTTCT
CGGCGTCATTGCACTCATAGCTCTCCCGCTCTCTTGTGAAGCCGCATCTTCTTCTTCTTCTGTCTCTCCCGCGAAAACCGAACCCGAAAAGGTT
ATGCTTGCTTCCACCTTCAAACGCTTCACGCGCTGCAGTGGTGTTGCTTCATCTGAAACCATAAAAGAGTCCACTCGCTGCATCGTATTCACCA
CCCGCATGTTCTTTTCCTTCTCGGAGTTGATGATTCTGTGCCACTCAGCAACCGCTTCTTCGTTTTGTTTCGCTCTTTTCTCCAACGTTT |
Primers for UN81028 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CACTCATAGCTCTCCCGCTC |
60.119 |
20 |
GCGAAACAAAACGAAGAAGC |
60.003 |
20 |
250 |
388 |
637 |
2 |
CACTCATAGCTCTCCCGCTC |
60.119 |
20 |
ACGTTGGAGAAAAGAGCGAA |
59.993 |
20 |
265 |
388 |
652 |
3 |
CACTCATAGCTCTCCCGCTC |
60.119 |
20 |
TTGCTGAGTGGCACAGAATC |
59.992 |
20 |
228 |
388 |
615 |
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