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Simple sequence repeat (SSR)
>UN00653
GATCGAAGTGAAATACATATAACAACTATGCAGAGGAATGTGGTTAAGATAATACATGGAAACACATAGAAACCTTGTAGGGAACAAACAAATC
ACAGAGTCTGAAACACACACACACACCTAGGAACAAAAAAGGGAGAAGGAGACAGTGTTGGTGGAATCAAACACAAGAGAAGGGTTCTTCAATT
GTTTTTGAAGGCAAATGTTACAAGAAAAGACTATTTACTTAGTCAGCAGTCCAGCTTTGTTCCACGACCTCCCGGACTCTTCTGTTGTACTCGC
GTTTGCTTTCGCTGAACATTCGTGCAGCTTCCGAGTTGGCAGGAGAATTCGGATTAGGATCACAGAGCAATGACTGGATGGATGTAAGTATGGC
AGCGACATCGTATATAGGACTCCACTGGTTTTGGAGAATGTCCAAGCATATACTCCCATCAGCATATATGTTAGGATGGAACATCCGTGAAACA
AACCGGACAGTAGGTGGTTTGTTTGGATAATCTTCTGAAAACTGCAGTGAGAGTTTGAAAGTACCTCCATCCCAGGGGGTATCATCAGGCCCGA
AAATAACAGCATTCCAGAGCATGATGTTGTTGTCTTGAGGAGCACCGCTGATTCCAGCAGGTGGGTCTTGCTGCAACCTCTTGAAGTCCCTCAT
CAATCTCTTCCTCGCTGGTGTCGACATCACTTTCTCTTTCACTCTATTATTGTTGAGCTACAAAGGGTAAAGATCGGTGGAGGTTCGTCGTCAA
GCGAGCATCTTTTCTTGCGGCGAGGTAAAGGTCTGACCTTTAAGCGACGATGATAACCACCTGATAGATGACAGAGAGTCTCCGATCGGTGATC
TTTGGATCACC |
Primers for UN00653 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGCAGAGGAATGTGGTTAAGA |
58.365 |
21 |
GCAAACGCGAGTACAACAGA |
60.058 |
20 |
260 |
29 |
288 |
2 |
TGCAGAGGAATGTGGTTAAGA |
58.365 |
21 |
AACAGAAGAGTCCGGGAGGT |
60.111 |
20 |
246 |
29 |
274 |
3 |
CAACTATGCAGAGGAATGTGG |
58.242 |
21 |
GCAAACGCGAGTACAACAGA |
60.058 |
20 |
266 |
23 |
288 |
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