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Simple sequence repeat (SSR)
>UN06707
TTTTTTTTCCGTTTTATTCCTCATCTATAATAATCTTGTCCCCATTGTTATCAAGAAAAGAAGGAAGGGAAAAAACAAAAGCAATGGTTATGGC
TATGGATCGGATCGCTTTTACCTCATCCCCATTCGCCTATCAACGTTCTTCTCATCCTCATGGCTACAGATCGTCTAGAGTTTTCATGTCTTCT
ACCATCCGTCCAGCCTCTACAGATGTCACCAATGGAAGGAAACCCCATCTCCCTCCTCGTGAGGTCCATCTTCAAGTGAAATATTCAATGCCAC
CACAAAAGCTGGAGATCTTCAAGTCCTTAGAAGGATGGGCCAACGACAACTTGCTGCCTTACCTAAAACCTGTCGAGAAATCATGGCAGCCAAC
TGATTTCCTCCCTGAACCTGAGTCAGAAGGGTTCTATGACCAAGTCAAGGAGCTGAGAGAGAGGTGCAAAGAGCTTTCTGATGACTACTTTGTA
GTGCTTGTTGGCGATATGATCACAGAGGAAGCGCTTCCAACTTATCAGACAATGATTAATACATTGGATGGGGTTAGAGATGAGACGGGAGCAA
GTCCTACTCCTTGGGCTGTGTGGACAAGGGCATGGACTGCTGAAGAGAATAGGCACGGTGATCCTCTCAACAAGTATCTTTACCTCTCTGGAAG
AGTAGACATGAGGCAGATTGAAAAGACCATTCAATATCTGATTGGTTCTGGAATGGATCCAAAGACTGAGAACAACCCTTACTTGGGTTTCATC
TACACTTCATTTCAAGAAAGAGCTACATTCATCTCTCATGGAAACACTGCTGGACTAGCAAAGAAGCTTGGGGACTCGAAACTAGCGCAGATTT
GCGGCACCATCGCTGCTGATGAGAAGCGTCACGAGGCTGCTTACACCAAGATTGTAGAGAAGCTTTTTGAGATCGATCCTGACACCACTGTCGT
AGGCTTTGCTGACATGATGAGGAAAAAGATAGCCATGCCTGCTCATTTGATGTACGATGGTCGTGATGACAATCTGTTTGAGCATTTCTCCTCC
GTGGCGCAGAGGCTTGGTGTCTACACTGCTAGGGACTATGCTGATATACTGGAGTTTCCTGTGAGGCGGTGGAACGTGGAGAACTTGGCTGGTC
TCTCTGGTGATGGACACAAGGCCCAGGACTATCTCTGTAAATTGCCAGCTAGGATCCGCAAACTCGAAGAGAGGGCTCAAGGGAGAGGCAAAGA
CACTGCAAGAGACATACCTTTCAGCTGGATATTTGGTCGAGAGATCAGGGCTTAAAAATAAGTAGTATGATGCACAAATCTCCTCACCATCACC
ATGATAAGGAAGGTTCTCTGTATTGGAACATATGCTAGATAAAGTATGTGTTGTTTTAGACTTGTTTTGTTGGGACCACTATTGCTATTTATTT
ATTTGTTTCAGTTTCTCTCCATTTGTTCTAGTATTGTTGTATCCACTTCTCTCTCTCTCACTTCCAACAATTTGTAATTTTAAAAGATTGGGTT
TGCTGTGTTTTCTTAGAGACTGTTAACTGATTATAAGAAAATTGATT |
Primers for UN06707 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCCTCACCATCACCATGA |
60.046 |
20 |
AAGAAAACACAGCAAACCCAA |
59.64 |
21 |
218 |
1301 |
1518 |
| 2 |
TCTCCTCACCATCACCATGA |
60.046 |
20 |
GAAAACACAGCAAACCCAATC |
59.467 |
21 |
216 |
1301 |
1516 |
| 3 |
TCTCCTCACCATCACCATGA |
60.046 |
20 |
AGAAAACACAGCAAACCCAA |
58.256 |
20 |
217 |
1301 |
1517 |
|
|
