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Simple sequence repeat (SSR)
>UN81819
GCTAACCCGTTGAAGAGAAGAAGAAGTAGAGCTACCAATCGATCAAGACTCCAAGGTCAAGGACGCTCTTGATTTCCCTTGCATCGATTCCTAT
CTCGACTTCGATTCCTGCAACTGGCTCGGGAACAATCCCAACATCGACGAGTTTGGCGTTAAAGATACGGACTTTGACTTTTTCGAGGACGAGA
TGGAGGCGATCGGACAAGGAGGTGAGGAGGTTCAGAACACGGTTCTGTCTGAGGCAGAGCCCAAGCTTTGTGATGACGTGGCGGCTGAACAAGC
TGTGGAAGAGTTAGGTAGTGCTGTTTCTGACAACTCTAAGCCAATGGAAGATGTGTCTGCGTCTGTTGATTGTCCCAACATGAAGTTGGATGAG
CCAGAGTTGAAGAAAACGGATGTGTGTTTGGCTTTAGGGTTGGAGAAGGTTAGTTTGACCACGGGTGATGATGAGAAGGGGAAAAGTATCAGTA
TTATTGCTGAGTCTGAGAGCGAAGAAGCCTCGAGCTCTTCTTCTTCATCGAGCTCCAGTGGTAGTTCCAGCAGTGAAGATGAAGAAGAAGAAGA
AGAGAGTGATGAGGAGGATAGTGAAGAAGAGGAAGATGAGATGGTCATTGTGAAAGAGGATGGTGTGGCAGGAGAGCTTGAAGAGGGTGAGATA
GAGAGTGCAGATGAGGTTGAAGAAGACGAAGATGAAGATAGTGATGATGACGATGACGATGATGAAGTGAATGAGATGATTGCTTGGAGCAACG
ACGAGGATGATGACCTAGGTTTGCAAACAAAAGACCCTATAAGGTCAAAGAATGAGCTCAAGGAGCTTCCTCCAGTTCCAGCTGTGGATGTGT |
Primers for UN81819 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TTGCTGAGTCTGAGAGCGAA |
60.008 |
20 |
TCACCCTCTTCAAGCTCTCC |
59.53 |
20 |
181 |
474 |
654 |
| 2 |
TTGCTGAGTCTGAGAGCGAA |
60.008 |
20 |
TGCTCCAAGCAATCATCTCA |
60.504 |
20 |
276 |
474 |
749 |
| 3 |
TTGCTGAGTCTGAGAGCGAA |
60.008 |
20 |
GCCACACCATCCTCTTTCAC |
60.52 |
20 |
160 |
474 |
633 |
|
|
