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Simple sequence repeat (SSR)
>UN82220
GGATGATGAAAGCAAACAACTTCTTGTGATTGGTTTTTTATTTTCACTACTCCTTTTGGTCGACGCTCACACAACCGAGTCAATATCAGAGCAT
GAAGAGAACGCAAACGCAAAAGCTGTGACCATAGAGGATCAAAAACAGATAAACAGAGGAAGACGCAGTGGTAGCGGTCAGAATCGTGGACGCA
GAAGCTGCGATCCACTCTACCAATACTTATTCGGAGTCTGTGGCCGTTGGCCTTTTCCTACAACACCTTCACCGGATAACCCTTTTCTCCCTTT
TCAACCACCACGTTCACCACCGCGTCCGAGACCACGTTCACCACCGCGTCCGAGACCACGTCCACCACCGTTGGTTCCATCTCCACCACCACCA
CGGCCACCACCTCGTCCAAGACCGCGTCCAAGGCCAACACCACCACCGCTAGTTCCATCACCACCACCACCACCCCCTACGCCTCTTGTTCCTT
CACCTCCTCCTCCATCTCCGCCACCGATTTTCTTATTCCCTTCGCCGCCACCACCAGTGCTAGCGTTCCCGCCACCGTTGGTTCCATCTCCTCC
TCCGCCACAGCCACCGCCATTATGGCTGCCTCCACCTGTGTTCACTCTTCCACCGCCACTCGATGAGTTTCCACCTATGCCACCAATAGTTTGG
CTGCCTCCTCCGGATGTTCCCGGCCAATCCTCGCCAGCGGAGGACTTTGATCTGATTCCACCTTAGTTAATGTAAACACCTACGTTGTAAGTTG
TAACATAAGGTCATGTTCTGTTTTGCCTCTCCAGCGTGTAAGATTATTAAATAAGTGTATGTCTAATGTAACGGAACAATTTTGATTT |
Primers for UN82220 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TCTCCCTTTTCAACCACCAC |
59.943 |
20 |
GGAGGAGGAGGTGAAGGAAC |
60.05 |
20 |
210 |
274 |
483 |
2 |
AACACCACCACCGCTAGTTC |
60.035 |
20 |
ATTGGTGGCATAGGTGGAAA |
60.192 |
20 |
240 |
412 |
651 |
3 |
CCTTCACCGGATAACCCTTT |
60.18 |
20 |
GGAGGAGGAGGTGAAGGAAC |
60.05 |
20 |
230 |
254 |
483 |
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