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Simple sequence repeat (SSR)
>UN00658
GACTTTCGAAATTTGGCGCAGGATGAGTTTGAGAGGAAGGATATATCCCTTATGGATCAGGATCACCCTGGATTTCCCACTTCTTTGACTAACA
CCGATGGAGTTCCTATCGATTATAGCTTCCCACCATGCAGTCTGAGAAAGTTGCTCCAACTCAGTTAAATCCGCAAATCCACTTTGATGGGAAT
ATTCAGCCGGATGTGTCTACCACTGCCGTAGCTGATTCGAGCACAGTAGACACACAAGGAGATTACGGTCAGTCAGTGTTCAAAGGTGCTGAAA
GCACAGATGCAAAAATGAATACTGGAGTTCCTCTTATTGACCTTGTTGCTGAGGACAGTGCCGACAGGTCTCTGCAGGTCATTAAGAACGACGA
CTTGGAAGAACTGAAGGAACTAGGTTCTGGTACCTTTGGAACTGTTTATCATGGAAAATGGAGGGGTACAGATGTTGCTATCAAGCGGATTAAA
AGGAGCTGTTTTATTGGTCGTTCATCTGAACAAGATAGACTGACCTCGGAGTTTTGGCATGAAGCTGGAATTCTTTCCAAGCTACATCATCCAA
ATGTTATGGCATTTTACGTCATAGTGAAAGATGGGCCAGGAGGAACTTTAGCTACAGTGACAGAGTACATGGTCAATGGATCGCTTAGACATGT
TCTTCTCAGCAACAGGCAGATTGATCGACGTAAGCGACTTATCATTGCAATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAGAACATA
GTTCATTTCGATTTGAAGTGTGACAACTTGCTTGTCAACTTAAAGGATCCCGCCAGACCGATATGTAAGGTTGGTGATTTTGGTCTGTCAAAGA
TAAAAAGAAACACTTTGGTAACTGGCGGTGTAAGGGGAACCCTCCCTTGGATGGCTCCCGAGCTACTTAGTGGCAGCAGCAGCAAAGTTTCTGA
AAAGGTCGATGTGTTCTCTTTCGGAATCGTCTTGTGGGAAATTCTTACCGGTGAGGAACCATACGCCAATATGCATTACGGTGCAATAATCGGA
GGCATAGTGAACAATACACTGAGACCAGCCGTGCCAAGCTACTGTGACCCAGAATGGAGGATGCTGATGGAGCAGTGCTGGGCTCCTGACCCAT
TTGTTCGACCTTCCTTCCCAGAGATAGCCAGACGTCTCCGTACCATGTCCTCCTCTGCAGTCCAGACAAAAGCTCAAGCCGCCAATCATCACCA
CAAGTAATCTGTCAGTTTATCATTGCGGGTACGTAAAAAAAAAGGTATGGTCTGTGTATATAAAACATATCCTTTCTGCTTCTTTCTGATTTCA
GAGTTGACAGTTTTAAAAGGTGTGTTTATTTCTCCAAGAAACCCTAAAACAGATATTCATATTTTGTATAGCCATTATTATTATTATTTAGTGT
AAGTAAATTTGGTTTTGGTATTATGACTTGGACTACTACTTCTGTAGTCGGGGAGTCTTTTTCCTTTTCAATAAAAGTTTCACAC |
Primers for UN00658 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGTCAGTTTATCATTGCGGG |
59.542 |
20 |
AAAGGAAAAAGACTCCCCGA |
60.046 |
20 |
246 |
1232 |
1477 |
2 |
TGTCAGTTTATCATTGCGGG |
59.542 |
20 |
AAGGAAAAAGACTCCCCGAC |
59.553 |
20 |
245 |
1232 |
1476 |
3 |
TCATTGCGGGTACGTAAAAA |
59.074 |
20 |
AAAGGAAAAAGACTCCCCGA |
60.046 |
20 |
236 |
1242 |
1477 |
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