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Simple sequence repeat (SSR)
>UN06748
TTAGCTCCGCGACTGATGATAGCCGAGACATGTCGTTTCAGGATCCGGAGAGAGTTAAGGTTAGGCAGTATGGGAAGGCGTGTAAAGAGCTCAC
GGGGGTTTTCAAGAGCAAAGAGATTGATGCTCATAAAGGGTCGATTTGGTGCATTAGGTTCAGTTTGGATGGGAGGTTTCTTGCTAGTGCTGGC
GAGGATTGTGTGATTCAGATTTGGGAGGTTGTTGAATCGGAAAGGAAAGGGGAACTTTTGTTGATGGATAAACAAGACGATGGAGGCGTGAATT
TGTCGGTATTGGCGAATGGATCTCCGGAGCCAGCTTCAGTGTCTCAAATGAGGAGAGGGAGAACATCTTTTAGCAGAAAATCAGTGAGTCTTGA
CAATGTCCTGGTTCCAGAAACAGTCTTTGGGCTTTCAGAGATACCCGTGTGCTCGTTTGTAGGGCATTCGGATGATGTGCTTGACCTTTCGTGG
TCGAAATCTCAGCACCTGCTTTCCTCTTCTATGGACAAGACAGTTCGCCTATGGGATTTGTCTAGCAAGACATGTTTGAAAGTCTTCTCGCATA
GTGACTACGTGACGTGCATCCAGTTTAATCCCGTAGACGAAAATTATTTCATCAGTGGGTCATTGGATGAAAAAGTCCGAATATGGAGCATTCC
TGATCATCAAGTTGTTGATTGGAAGGATCTTCATGAGATGGTCACAGCTGCCTGCTATACACCGGATGGTCAGGGTGCATTGGTTGGTTCATAC
AAGGGGACTTGTTGCTTATACAACACAAGTGATAACAGACTGCAGCAGAGAAAGGAAATCAATCTGAAGAACAAGAAAAAGAAATCCAATCACA
AGAAAATCACTGGTTTTCAGTTTGTGGCGGGAAGTTCATCGGAAGTGCTGGTCACATCTGCAGATTCACGTGCGCGTGTGGTTGACGGTGTTGA
CCTTGTTCACAAGTTTAAAGGATTCCGCAACGCCAACAGTCAAATCTCGGCCTCACTTACATCAAACGGAAAATTCTTAGTCTCAGCGAGCGAA
GACTCCAATGTCTATGTATGGAACTACGAGTCAGAGACTCGAGCTGGTAGAAGCAAACGTGTAACAGTCACAAACTCATACGAACACTTTTACT
GTCGAGACGTCTCTGTGGCTGCACCTTGGCCTGGCAAAATCAGTAACAACAACAACAACAACAGCCCCGACCAATCGCCTTTCACAGCCAATAA
CCCTCCAACACCTGCCAACGATCCAATCAACAACACAGCCGTCACCAACGGTATCATTTCGAGCGCCACAAACGGCTACTTCTTCGATAGAATG
TCAGCGACTTGGCCCGATGAGAAGCTTTTGCTTGCTGCAAAGAACCGAGCACGAACTAGCCCTAGTGTGAGCGTGGACTTGTTTAATGGACCGG
TTAACACAAAACCGAACGCTTCGGCTTGGTTTATGGTGGTCGTGACCGGCGGTTTACGAGGTGAGATTAGAACTTTTCAGAATTTTGGATTACC
GGTTCGTCTTTGAAGATGATATTTTTTACTTGGGTAAAAAACCATCTTTATTCAAAAGTGTGTATAGATCGAGAGAAGGTTAGTTCTTCCACTT
ACCTCTTTTTTTCCTTTTACCACGCCTCTTTTATTTATTTTTTTCCTTAATATTTGTTCTCTCTGAAATTCAAATCTTTAGGAAATACATATAT
ATAATTATTTTTAATGTGAAAAATCAGATAGCTGAAAAAAGAAAATTCATGTACTGCAGTGTTTTATGTATTAAAGTTGAACTTTGTGTAGAGT
TTGTCTTTGCAGTATTTTGTATACACATTCTGTATTTTTACATTTGACATTTCTATACATGTAAAAATCAATTGAATAGAGGTTTTTGTTTATC
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Primers for UN06748 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CAACAGTCAAATCTCGGCCT |
60.255 |
20 |
GGAGGGTTATTGGCTGTGAA |
59.933 |
20 |
255 |
974 |
1228 |
| 2 |
GTTTAAAGGATTCCGCAACG |
59.586 |
20 |
GGAGGGTTATTGGCTGTGAA |
59.933 |
20 |
276 |
953 |
1228 |
| 3 |
GTCTCAGCGAGCGAAGACTC |
60.44 |
20 |
GGAGGGTTATTGGCTGTGAA |
59.933 |
20 |
209 |
1020 |
1228 |
|
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