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Simple sequence repeat (SSR)
>UN82462
AAAACATAATTAAAATTTAAACTCGTTTATATATTTAATTTTTATTATATAAAATAATTTATAATTAAATTGGTTTACAAAAATATAAAAAATC
TAATTAAATGAAAAAAGACTAAACCAAATAAACCAATAACTTAAACCATGCTTAAACCTAAACCAAGTTTAAACCTAATTGATAACTAACTAAA
CCTATGTAGCCGCCGCTCCACCATCTCGCCGCCCTGTACATCCCGTCGTCTTCCTCCTCCATTCTTCTTCGCCTCCTCCTCGCGTCTCTGTCTC
TCTTCTTCTTTCCCGGATCCACCTCCACCTCCTCCACCACGAGCTTCCTCTGACATCTCCACACAATAGCTTCTTCGCCTTGTCTCCTCTATTC
CATGGAGGTGTGGTGGTGGTGGTGATGCTGGGACGGCGAACGAACGGAGGTCATGTGTGGTGGTGGTGGTGGTGTTGGGACAGAGAACAAATGG
AGGCCATGTGGTGGTGGTTGTGATGCTGGGACGGTGGGGAAGTCGTGTATTTGTGGTGATGATTGAAGAAGATAGAGATTCAAAGGATTAAAGA
AGAATTAGAAGAGATTAGTTTTAGATCTGA |
Primers for UN82462 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CCTGTACATCCCGTCGTCTT |
59.989 |
20 |
CATCACAACCACCACCACAT |
60.138 |
20 |
275 |
221 |
495 |
2 |
TACATCCCGTCGTCTTCCTC |
60.073 |
20 |
CATCACAACCACCACCACAT |
60.138 |
20 |
271 |
225 |
495 |
3 |
CCTCGCGTCTCTGTCTCTCT |
59.883 |
20 |
CATCACAACCACCACCACAT |
60.138 |
20 |
230 |
266 |
495 |
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