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Simple sequence repeat (SSR)
>UN82873
AAATCACAATTCAAAAATCGGTGGAGATGAGAGAACATAAATCATAACTTTCCCACTTCATTTACTTCTCACACACGCAATCTAAACACAATTA
CAAAAAGCAACAAATAAGAATCCAAAACCGGACCTGTACCGGTTTTAACCCAACGGTCTGGCTATTTCGAAAGAACACTCCATTTAGCAAGCAG
GATGAGGAAGACGATCAAGAACACAAGCGAAGAAAGACCGATGGCTACACCAAGCACAATCTTGTTAGACTCATGTTTCTCTTCCTTCTTATCC
CCATCGCCGTAATCTTCCTCCTCCTCCTCATCCTCCTCGGACAACGTCGAGTCCTCCTCCTCCTCCTCCTCCTTCTGCGGCGGAGACGATAAAG
GCAAACCGTATTTATCACACGGAGCAACACCAAGATTCAGTTTCCAAGACAGAACAGTGTTGTTATAACAGAGACCGCTGTTCCCTCTGACTTG
GAAGAACTCGAGTTGTTTAATGAAGCTCTCGTTAAACGGCAACACTCCCTGGAAGGAGTTGTCAGCGAGGTTCAAGTGTCTGAGACTCTCCATC
CGGGAGAAGAAGCTCGGTACGACGCCGTTCAGCTGGTTCCCGCTTAGATCCAGATGCGTCAGCCGAGAGAGCGACGAGACCGAGCTTGGGATCG
GTCCTGAGAATCTGTTATAAGCCAGTGACAGGTTCTGCAGCGATGCCAAGTCTCCGATCTTG |
Primers for UN82873 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ATCGCCGTAATCTTCCTCCT |
60.06 |
20 |
TTGCCGTTTAACGAGAGCTT |
60.018 |
20 |
228 |
285 |
512 |
2 |
ATCGCCGTAATCTTCCTCCT |
60.06 |
20 |
CACTTGAACCTCGCTGACAA |
60.025 |
20 |
264 |
285 |
548 |
3 |
CGATCAAGAACACAAGCGAA |
59.988 |
20 |
GAATCTTGGTGTTGCTCCGT |
60.119 |
20 |
215 |
200 |
414 |
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