 |
Simple sequence repeat (SSR)
>UN00661
GGTATAAATAGATATTCATTCCTCACATATCGTATAATAATTAGTAGAAACTTACATCGCAGGCATGAAATAACAAAAACATTCAGGTTTCCAA
GTGAGACTTGCCGGTTTTTTTTTTTGAGAGAGAAATTAAAAAGCCTATTTTCACGAATTTACACAAATTGTATTCAAACAAAACAAAAACAAAT
GAAATAGTGAGTGATATGATGAAGCGTGGGATCAGATTTGGAGGATATCAAATCAATAGGGGTTGTTCCTGTGAGGAGTTTGAGGAGCAGAGCG
AGGAGGATTGAGCAGAGGCTGAAGAGCCTTCACCACTATGCTCATGTTTGGCCTGAAGTCTGCCTCATATTGTACACATAGCGCAGCTACAGCA
GCCAGCTTGGCAACAGCCTTGGGAGGATATTCTCCGTTTAGTCTTGCATCAACGCACTGCTTCACCTTGTCTTCACTCAGTTTAGGAGTTGCCC
ATGTAACGAGACTCTGTTGTCCTCGGGGTAAGGTATGATCAACTGGTTTACGACCTGTGAGGAGCTCTAGCAGAACAACCCCAAAACTATACAC
ATCACTCTTTGTGCTCAATGTTCCTGTCATTGCATACTCTGGAGCATGATAACCGAAGGTTCCCAACACACGAGTTGAGTGAAGGCGAGCAGCC
ATGTCAGGGGCTTGGTTGGAGAGATCGAAATCAGCAATCTTAGCAACATCATCGTCAAACAGAAGAACATTGCTGGATTTGATGTCTCGGTGGA
CAACATGAGGGTTCGCCTTCTCATGCAAGTACTCCAGTCCCCTAGCCGCACCAACCGCTATTTTAACTCTCTGGTTCCACGACAGAACAGGTCC
AGGCTGTGCTCCTTTCACTCCTTTCCTACCATGAAGAATATCATGAAGAGAGCCATTAGGAGCAAACTCATAAGCGAGCACACGGAGTGGGCCA
TCAACGCAATATCCCAAAAGTGCAACAACATTGTCTTGTCGCAATCTCGAAACCATTGATACCTGGGCGAGAAACTCTTGATCAGGTTGCTTAC
TGGAATCAAGTTTCTTAATGGCAGCAGCCTTGCCGCTTCTAAGAACACCGTAGAACACTCTTCCATAAGAGCCCTCACCAATCAAGGACTTTGA
ACCATAGTTATCGGTTATGTCCTTCAGCTCATCAGCTGGAATGGCCGGCACAGAGATGGGCTGCATCTGAATGACTGGCGTGTTCTTTGGCGGG
TCTGTCCTTGCATGGTGAACTCCACCGTGACCTGCTGCGCCGTAGACAGGCTTAGGACCAGTTTCAGCAACTCTACGAAAATCGTCACCACCAC
AACAACCAAAGCAGCTCATTACGCTCTTCTCTCACAACACAAACCACACTTTTTCCAAAACAAAAGAGAGAGAGAGAAGACTGAGTGTGGTTGA
ATCTTCTTCCGATGAAAGGAGAAGAAGAAGGGTAGGGAGGATTTTGACTATATCTTCTTATACGTATGGTTGGTGGCGAAGCTTTAGGCTTAAG
AAGGCAGAGGGCAGACTTTTCTTCCCGGCGGAAATTTCTTATTAAAGGTGTTTGGAGCAGATGCGCACGATAGCTTACTTCTTCTTCCAAGTTC
CAAGTTGTAGTCCTCCTCC |
Primers for UN00661 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TACGAAAATCGTCACCACCA |
59.964 |
20 |
CCCTCTGCCTTCTTAAGCCT |
59.976 |
20 |
220 |
1296 |
1515 |
| 2 |
CACCACCACAACAACCAAAG |
59.89 |
20 |
CCCTCTGCCTTCTTAAGCCT |
59.976 |
20 |
208 |
1308 |
1515 |
| 3 |
TACGAAAATCGTCACCACCA |
59.964 |
20 |
TTAAGCCTAAAGCTTCGCCA |
60.109 |
20 |
208 |
1296 |
1503 |
|
|
