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Simple sequence repeat (SSR)
>UN06896
ACCAAAGAAATAAAACGAAATATTTACTTTTGGTAGTTACATAAGCACTGAAAGAGATAAAAAGACTTCACAACAGCTTTCTGATCTGAGAAGT
CAAAATCAGTACACAAAGACAAAAGATCTAATCGTACATGACATATGATTAAGTTTTGAGTTATATCACATTCTTATTGAAGCGTGGACCCCAC
AAAAGAAGGTAAGACTCCGTGATCTTCTGTTCGAACGACAGTACAAAAAGACTTGGCTGATTCTTCAAGCTGAAGGATAATTCAATCATTAAAC
TTCCTCTCTATAAAGTTTCCAATAAGTTGAAGAAGAGAAGAAATCGAGAAAATTACATGGAAGAAGATAGGAGAAGTAGAGGGCATCCTCTGTT
GAGATCGAAGAAGAGACAAGGAGGAGGAGGAGGCTATAGCCATGGCTTCTCACAATCTCAGATTCAGTCTCTCGCCGTCATCTGTCAAACACTC
CTCCCTCCTCCTCCTGAGACCAGGGCGGAGCAAAAAGCTGTTGATACCTTCGACGTAGCCTCCCGTTCTAAGCCACCTTTCACCGATGAGGTTC
CCTCTCTTTATCCTCTGTTCTCTAGTGTTGACTTTCTGAATCAAGATCCTGCTGGGTATGATTAACTAGAGGTC |
Primers for UN06896 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAGGGCATCCTCTGTTGAGA |
60.349 |
20 |
ACAGATGACGGCGAGAGACT |
60.017 |
20 |
101 |
361 |
461 |
2 |
GAGGGCATCCTCTGTTGAGA |
60.349 |
20 |
AACCTCATCGGTGAAAGGTG |
59.966 |
20 |
203 |
361 |
563 |
3 |
GAGGGCATCCTCTGTTGAGA |
60.349 |
20 |
AGAGAGGGAACCTCATCGGT |
60.073 |
20 |
211 |
361 |
571 |
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