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Simple sequence repeat (SSR)
>UN83511
AAGTTTCACCTTTACCATTCTTGAAGTCTCCACGGCGAGTTTGTACTGAGTCACACGTCTCCGACTCGCCCTGGAGAGGCGAAGAAGAAGAAGA
AACCCAACAATGGGGTTTCTCCAGGTGCTTCTCTTTCTCCACCTCTTTCAAAAACTCTCTGCTCAGTCTCCTCCGACCAATAATGCGACTTCTC
TCGACGCCCTTCTCCAAGATTACTCCTTTAGAGCCTTCGTTCGTCGTCCTCGCACCGGCATTCTCTACGACGCCGCCACCGTTCCTTCCGATTT
AACCGGGATCAAACTCTCCGCGGTGAGACTCAGAAGCGGAAGCTTGAGAAAACACGGAGTAACTTCTCTCAAAGAGTTCTCAATTCCGAAAGGC
GTAATCGTGAAGCCGTACGTGACAAGACTCGTCCTTGTTTATCAGAACTTAGCTAACTACTCTCGCTTGTATTACCCTTTGTCTGGCTATGACT
ACGTCGCTCCTGTGCTGGGTCTTCTCGCTTACGACGCCAAGAATCTCTCCGCCGTTAACTTGCCGGAGTTCGAGTTAACGGCGTCTAATGATCC
CATTAGGATTGGTTTCACTGATCTCGAACGTATCCCGCAAGGGTCTAGCGCTAAGTGCGTTAGTTTTGATTTGCGAGGGAAAGCGAGTTTCAAG
GACTCGGTTCAGCCTGGAAACACTTGCGAGACTGATCGTCAGGGACATTTCTCTGTTGTTGTGAAGTCTGTAGCCTCTGCTCCGTCACCAAGCG
AGGGAAGGACGAAGAAGAAGAAGAAGAAGGAGAGCTCTGAGGAAAGTTCAAGGACTTGGATCATTGTTGGATCGGTGGTTG |
Primers for UN83511 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTCCACGGCGAGTTTGTACT |
60.312 |
20 |
ACGACGAACGAAGGCTCTAA |
60.015 |
20 |
208 |
28 |
235 |
2 |
CTCCACGGCGAGTTTGTACT |
60.312 |
20 |
GCATTATTGGTCGGAGGAGA |
60.036 |
20 |
153 |
28 |
180 |
3 |
CTCCACGGCGAGTTTGTACT |
60.312 |
20 |
TTAAATCGGAAGGAACGGTG |
59.931 |
20 |
257 |
28 |
284 |
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