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Simple sequence repeat (SSR)
>UN83511
AAGTTTCACCTTTACCATTCTTGAAGTCTCCACGGCGAGTTTGTACTGAGTCACACGTCTCCGACTCGCCCTGGAGAGGCGAAGAAGAAGAAGA
AACCCAACAATGGGGTTTCTCCAGGTGCTTCTCTTTCTCCACCTCTTTCAAAAACTCTCTGCTCAGTCTCCTCCGACCAATAATGCGACTTCTC
TCGACGCCCTTCTCCAAGATTACTCCTTTAGAGCCTTCGTTCGTCGTCCTCGCACCGGCATTCTCTACGACGCCGCCACCGTTCCTTCCGATTT
AACCGGGATCAAACTCTCCGCGGTGAGACTCAGAAGCGGAAGCTTGAGAAAACACGGAGTAACTTCTCTCAAAGAGTTCTCAATTCCGAAAGGC
GTAATCGTGAAGCCGTACGTGACAAGACTCGTCCTTGTTTATCAGAACTTAGCTAACTACTCTCGCTTGTATTACCCTTTGTCTGGCTATGACT
ACGTCGCTCCTGTGCTGGGTCTTCTCGCTTACGACGCCAAGAATCTCTCCGCCGTTAACTTGCCGGAGTTCGAGTTAACGGCGTCTAATGATCC
CATTAGGATTGGTTTCACTGATCTCGAACGTATCCCGCAAGGGTCTAGCGCTAAGTGCGTTAGTTTTGATTTGCGAGGGAAAGCGAGTTTCAAG
GACTCGGTTCAGCCTGGAAACACTTGCGAGACTGATCGTCAGGGACATTTCTCTGTTGTTGTGAAGTCTGTAGCCTCTGCTCCGTCACCAAGCG
AGGGAAGGACGAAGAAGAAGAAGAAGAAGGAGAGCTCTGAGGAAAGTTCAAGGACTTGGATCATTGTTGGATCGGTGGTTG |
Primers for UN83511 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGGAAACACTTGCGAGACTG |
60.025 |
20 |
ACCACCGATCCAACAATGAT |
60.057 |
20 |
159 |
673 |
831 |
2 |
GTTTTGATTTGCGAGGGAAA |
60.053 |
20 |
ACCACCGATCCAACAATGAT |
60.057 |
20 |
205 |
627 |
831 |
3 |
TGCGTTAGTTTTGATTTGCG |
59.88 |
20 |
ACCACCGATCCAACAATGAT |
60.057 |
20 |
212 |
620 |
831 |
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