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Simple sequence repeat (SSR)
>UN06940
GGGTCCAAGTGCTTCTCTGTTCTCTCTGCCCGCACCACACACTTTACTCTCCCCCAACAGTAGATCTCATCTCCCATTTCAAACCCTAGAAAAA
TCAATCAAATTCAATCAGCCACAGTTTGCTCCACCAATGGCGAGCTTCATTCCCCCCAAGTCACTCCTCCTTCTACTCCTCTTGCCTTTACTCT
CACTCTTCTCCGCAATATCTGAAGCTAAACCATCCTTTACCTTCACAAGCTTCGGTAAAAATGGAAGCTTTGCGTCCGACGACATCGCTCTGTA
CGGCGAAGCAAACCTCCTCAACGGCGGATCTTCGATTTCGATCCAGCTGAATGACTCGGTGAGTCATAACAGTGGGCGAGTCGTCTACAAGAAG
CCCATTGAGTTCGTCGAGACCAAGTCCGAGTATCCCGCCGGATTCTCTACTCTCATCGCTTTCTCCGTCAACGGTGGCGGGAGACTCGGGTTCG
TCGTGTTTCCTGTTAACGGAACGTTTGAGCAGTCTCTGTTCGAAGTAAAGTTCGGTGCTTTCGAAAGGAATGTAACTGTGAGTGTAGATGGCAC
TACGGTTCCCGAGGAGATTCGCAGTTTCACGGTTGCTAACTTGGAGGGAGAGGATAATAAGGAGAAGAAGGTGGTGTTGTTGTACGCTTGGGTT
AATTACATTTCAAGTGGGAAGTTCTTGGAAGTCCGTTTAAGCAAATCAGAGAGCTTCGAACATGTTGATCCTTTGATGTTCACTAGGATCGACT
TGTCGGGAATGTTGAAAGGTGACAATGAGTTCATGGTTGGTGTGAAGGCGTATGGTGGGAACGTGAATCTCCACTCTTGGAGCTTAGAAGCGAG
GAGTGTCTCTAAGGGTGTGCACTCTTATGGGGCGATTATGGTGGAGAAGCTTATAGAGGAAGAGGAGGCGGAGAAGAGGAGGAGGAGGAGAAGA
GCGAGGGCGTGGGAGATTGTGACTTGCTTTGTGATGACCTTTGGGTCTACAGGGCTTGTGTTTTTCGCCATGATGCATATATGGGCAGCTTTCA
AAAGGAACAATCTCGTGATGACGAAGGAGTTTGAGTATGAGAAGATGGAGAAAATGGAAGCTGTGATGGGTAAAGCTGATAGTGCAAAATGAAA
ACAAGTGAAGTAATCAAGTGTTGTGATATATCTCTGTGTGTTTGTTTAGGATATGATCTTTTTATGTAATCAAGTAGATTCTTCACTGGCTAAA
TATAGCCCCCTTGTTTTTCATTTCATGTGTGGCAAACATTGTTTCTCTATGGCATGTTCAGTTTGTTTCA |
Primers for UN06940 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCACTCTTATGGGGCGATTA |
60.06 |
20 |
AGCCCTGTAGACCCAAAGGT |
59.994 |
20 |
132 |
865 |
996 |
| 2 |
GATCGACTTGTCGGGAATGT |
59.934 |
20 |
AGCCCTGTAGACCCAAAGGT |
59.994 |
20 |
252 |
745 |
996 |
| 3 |
AGGGTGTGCACTCTTATGGG |
59.989 |
20 |
CCCATCACAGCTTCCATTTT |
59.933 |
20 |
247 |
858 |
1104 |
|
|
