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Simple sequence repeat (SSR)
>UN84147
CCCGGAAAATCTTCCCTAGATTTCTTTCACTCACACACACACATATATATAGACAGCTCAAGATTCCTATAGGCTAACAAGATAATGGAGCCGA
CTAAGAGACACGACGACAATACCTTTAGCTTACAGAATGTTCTATTCATTGTCAAAGTCTCAGCTGTCCTAGCCTTTTCCGGTTACTGGGGTTA
CCCGACGATTATAAATGTACTTGAAGGCGTTGAACTTTGGTTCAGTTTCTTTCTAAGAAACGTTTTCTTCATCTTCATCATCGTAAACGCTCTC
ATCGGCTCGATATACTTTAGCTTTCTCCAAACCACCGGAAAAAAGAAACCGGATCTCTATGATGAATATATCGCCGCCGTACCCTCCGTCGTCC
GTCCTTCCCCGGAGCCTTCTTCTGCCATGATGGAGATCGGAGACTACGGTGGTGGATATTATAGTAACTCGAGTTACCAGGAGATCACTGTGCC
GCAGTTTCAAGCGGTTAATACGGTTGTGGAGAGTAAATGTTATGAACGAGTAGTGATGGAGACGAGCTCTAAGAGTTATAGGAAGACGACTAGT
TTTGAGAAGGAGAAGAAGAAGAAGAAGAGGTCGACGGTGGTGGAGTATCGGAGGACGGAGTCGGAGAGAGTGATGAAAACGGCGTCGTGGAGGT
CGCATGCGATGGATGAGCTGAGCAGCGAGGAGTTTCGTATGAAGGTGGAGACTTTTATCACGGGGTATAAGAAGAAAATGATAAACGGTGGTGT
TGACCAGTGGCAGAACTGTGTCCCCCAGTGGCAAGATCAGCCTGATCACAATGTAACTGGTCGTCATC |
Primers for UN84147 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AGCGGTTAATACGGTTGTGG |
59.883 |
20 |
CCCCGTGATAAAAGTCTCCA |
59.926 |
20 |
244 |
480 |
723 |
2 |
CGCAGTTTCAAGCGGTTAAT |
60.264 |
20 |
CCCCGTGATAAAAGTCTCCA |
59.926 |
20 |
254 |
470 |
723 |
3 |
AGCGGTTAATACGGTTGTGG |
59.883 |
20 |
ACGCCGTTTTCATCACTCTC |
60.263 |
20 |
170 |
480 |
649 |
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