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Simple sequence repeat (SSR)
>UN84436
AACTTAGTGGGGTTCTCTGGAAAATATTCGAATTTTTTGAAAAGATTTTTGACTGATGATGACACTTAACTCACTCTCTCCAGCTGAATCCATC
TCTCTTTCTTTCTTGGATACTTCCAGGTTCAACCAAACCCCCAAACTTCCAGGTTTCTCTTCCCCAAATCTCTCTCTCTCTCTCTTGGATTAAA
AATAAAAGCTTCAAACTTTCAATATTTTTTCGTAATGCTCTTTTGAGTTTTGACATCTGGGTTTCTTTGATCTGTGACATATGAGACCTGATTC
TTTGTAAATTCTTCGATTTGAATTGAGACACTAATCGTGTGATTACTTCAGTACCTGAGTGTATTAAAGTTCACATCTTTGGGACTTGTTGTCA
CAGGTGGGTTTAGTTTGAGGAAGAAGAGGACTCAAGGGAGAGGTTTTGTTGGAAAAGGAGTCAAGTGTTCAGTGAAAGTGCAGCAGCAGCAGCA
ACAACCTCCTCCTCCTCCAGCGTGGCCTGGGAGAGCTGTTCCCGAGCCTCCTCGTCAATCTTGGGATGGACCTAAACCCATCTCCATCGTCGGT
TCTACTGGTTCTATTGGCACCCAGACCTTGGATATTGTGGCTGAGAATCCTGACAAATTTAGAGTCGTCGCTCTAGCTGCTGGCTCTAATGTTG
CTCTCCTTGCTGATCAGGTGAAGAGATTTAAACCTGCACTGGTTGCTGTTAGAAATGAGTCATTGGTCACTGAGCTTAAAGAGGCTCTAGCCGG
TTTGGACTATAAACC |
Primers for UN84436 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CTTCCAGGTTTCTCTTCCCC |
60.045 |
20 |
CCTGTGACAACAAGTCCCAA |
59.565 |
20 |
241 |
140 |
380 |
2 |
CCCCAAACTTCCAGGTTTCT |
60.332 |
20 |
CCTGTGACAACAAGTCCCAA |
59.565 |
20 |
248 |
133 |
380 |
3 |
CTTCCAGGTTCAACCAAACC |
59.425 |
20 |
CCTGTGACAACAAGTCCCAA |
59.565 |
20 |
267 |
114 |
380 |
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