Simple sequence repeat (SSR)
>UN84900
TCCTATTCCTCTGGTACTCAAGGACTCCAAGACTGACAGCAAGGTCAGAAGAAAGCTTCTTCCTTCTTCCTCAACATCCCAACATGATGCTGGA
GAGCTTCCCGTGATAGTGCTTGCTGATCTTGACAGCTTGTTCCTTACTGTCTCAGGTCTCTCTCTTCATTACAAGATTTCCACACCTGCTTCTC
CTCCTCTTGAACCTAGTTCTATGCTCAATGTCCCTGAATCAATGGCTGGAATGTTGAAGCTTGACAGGAAGTTATTGACCATGGTTACGATAGA
CAAGCTCAATCATCATCACCATAAAAACTGCAGCAGCCTCTTCGACAATTCTTCTTCTTCTTCCTTGCATGATCCTCTCCTTGAGGATTCTTCT
CCCACTTCTCCTCTTCTTTTCAAAGACACTCATGAAGAAGCACATGACATGGATTCCTCCATTTGCGGGGAGCATCATCAAGATCCCTCAAATG
GCAGCGGTCAATTTGGTGTAGTGCTGATTCATGAATTTGGAGGTGGGGTCTTCTCTTGCATGAATGTGATGACATCTCTCGCCCA |
Primers for UN84900 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AAAACTGCAGCAGCCTCTTC |
59.763 |
20 |
AAGACCCCACCTCCAAATTC |
60.169 |
20 |
217 |
306 |
522 |
2 |
AAAACTGCAGCAGCCTCTTC |
59.763 |
20 |
TTCATGCAAGAGAAGACCCC |
60.195 |
20 |
229 |
306 |
534 |
3 |
AAAACTGCAGCAGCCTCTTC |
59.763 |
20 |
AGAAGACCCCACCTCCAAAT |
59.795 |
20 |
219 |
306 |
524 |
|
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