Simple sequence repeat (SSR)
>UN00698
TCAACAAATGATACACACTCACTCTTTGGCATAACCTTTTTGAATATAATATAGGATGTTTCAGAAATGAGTGAGAGACAAAAGACTCAACAGT
AAAGAGTGGGGGAAAGGTATTGTTGTTCCACACCGCAGCAAACAAGAATTACAAAAGCGAAGAAGATAGATAGAAAGAGTAGTGACTCAAGTTT
GTGCATTTGGTTGAGTTTGAATAGAGATGAGTGTGTCTACTCTACCTCGCTTAGGATGGGAACAATGAGAGGCTTCATCTGCGCAATGTATACG
ATTGCCCACATCATCCAACAGCAGACAGTGGCTGTAATGACCAATGTAAAATGTAGCAGATTGGTGGAGGGGCCTTGGTTGAAACAGATTCTTG
TGAAAATCGAAGCAATGATGCCGACCACAGCGAATATTACAGATGTTACTAGAAAAGCCATGTCTGATCCTGATCCTGATCCTGATCCTGATCC
CAAACAGAGTAATCAGATTCAAATTGAAGCTCCTGATCGCCAATGGCCGGCCGATCGTATAAGGTCCAGATTTTGCGAGCC |
Primers for UN00698 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AAAATCGAAGCAATGATGCC |
60.045 |
20 |
CTGGACCTTATACGATCGGC |
59.551 |
20 |
161 |
379 |
539 |
| 2 |
CATCCAACAGCAGACAGTGG |
60.309 |
20 |
CTGGACCTTATACGATCGGC |
59.551 |
20 |
246 |
294 |
539 |
| 3 |
CTCGCTTAGGATGGGAACAA |
60.206 |
20 |
GCGATCAGGAGCTTCAATTT |
59.415 |
20 |
277 |
234 |
510 |
|
|
