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Simple sequence repeat (SSR)
>UN07475
TGTCTCCAGCAAGAGAATATGTTGGAGTCAGAAAGCAATCAAAACCCTTTTGATCACGTTCCAAGTAATATTATCGGGCCTGTTCCTCCAGCTC
CTGGGAGCCAGCATCCACAGTTTACGAATGCTGACCCTCAAGCACGTGATGCCCTTCGTATCCCTAACTTTGTGGTTCCGCAACCATTTGATAC
GGCGAGTTACTATGCTCAGTTCTACCGATCAGGCCCTGACAGTGATGGCCGTGTTTCTCCCTTTGTTTCTCCAGGGGTTGCATCCAAGTTTAAT
GGAAATGTTACAGTATTGCCCCCTCATTCGTCTCAAACCATGCAAGAGGGTGGAAACAACTTAGTTCTGTCGACTGCTAGTCCAACTCCACTGG
TAACACAGCCTGCTGGGCTAATGCAGAACTCTATACCTGTCACGCAGCAGCCTGTTCCTTTCTTACGCCCCCCAGGGTTACACATGTCACATTA
TCCACCGAATTACATGCCATATGGACACTACTTCTCCCCATTCTATCTACCTCACCCGGCAATGCAACAGTTCTTAAGCAATGGTGCATTTGCT
TAAGAACCTCAGGCAAGCAGTGTGTATCCTGCTGCTCCTCCACCCCCTGGAGCTGCAACGGGAGGCAAATACACACTCCCTCATTACAAGCCTG
GGAATAATACAAATCATGTTGGTATGCCTGGTGGTTACGGACCATCACATGGTTCCTTCCCAGCAGGATATAATTCCAATTCTGCTGCTTCAGC
TGGGAATTCAACTTCCAATGAGGATCTCAGCACATTGCAGTTGAAGGAGAACAACGGCTACAGCACAACAGGGCAACAGAGTGAAGCATTACCT
GTTTGGATTGCTGGACCAGGACGAGATATGCCGAGCCCTTTCTACGGTTTACAGCACCATGGTCAACACGTGACTTACGCTCCAGCACAAGCCG
GTCACGTGGCGTTCCCAGGTATGTATCATCCGGGACAAGCAGCAGTGGCAGCAGCAGGAGTTCACCATCCGCTCTTGCAACAGTCTCAGGGTGT
TGCTGGAGCTGATATGGTTGCACCTGGGCCTAACGTCTTTCAACAGCCTCAGCAAACACCGATGAATTGGCCAAGTAATTACTGAAACAGGAAG
GAAAAGAAGATTTTGGAGGGATTGAACCAGATTATCAGGAAGATACGGTGCGGGTTTTTCGTTGACTGGGGTGTGTGTGTGTATGCCATCCAAC
AAATTACCGAAGAAAGGAAACTATGAAGTTGAGCATGAAGGGATTGACACAGGATGATCATAAAGGATAGGGGAAGAAGGTATTGCTTATTGAA
TCTAGTTTTTTTTTTGGTGTTTCTATATCTTTTCATTTTTTGGGTTTTAGCAAAATATTTGCTTTTTTTAGTTATTTTTAGCTTTTTTGAGCTA
AGCCAACAGAACTTTTGCTACCTGAGTCTGTATTTGAAGACTCTTCCTTCTTTTGTCAGCCTTTTGTGAGAACATGTTCAATATGGAGTTAACC
TGAATTTTTTTTATTTGATATTCAAAATACAAGAAAATATATAGAATGTAATAGTCTTCCTGAATATTCAAATATTATTGAAGTGTTTTCTTG |
Primers for UN07475 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCAACAGCCTCAGCAAACAC |
60.032 |
20 |
TGTCAATCCCTTCATGCTCA |
60.201 |
20 |
198 |
1074 |
1271 |
| 2 |
CGCTCTTGCAACAGTCTCAG |
59.922 |
20 |
TGTCAATCCCTTCATGCTCA |
60.201 |
20 |
262 |
1010 |
1271 |
| 3 |
TGGGCCTAACGTCTTTCAAC |
60.11 |
20 |
TGTCAATCCCTTCATGCTCA |
60.201 |
20 |
213 |
1059 |
1271 |
|
|
