 |
Simple sequence repeat (SSR)
>UN07604
GGCCTCGCCGAATCTCTATTCTGTCCTTTTCTTTCTCCTTCCTTCCTTCCTTCCTTCTCCATTCTTCAAAACGTTTCATCGCTTCCATGGAGGC
TATGCTTCTCAAACCCACTTTTTACAATACGCCAATCCGCAACCTTGCCAACCCTTCTGCATCTGTCTCGTATTTTGCCTGTAAATCGAGATTC
GGACAACCTGGGACTCTCTCCCTCCGACACTCCTCCGCAGCTTCTCCGATCCGATACTCGAGGAGCCTAAGGGTGGACGAGAGTGAGAGCTTGA
CACTTGACAGCATAAGACACTCTTTGATCCGTCAAGAGGACAGCATCATCTTCAACCTTCTCGAGCGAGCTCAGTATCGCTACAACCCTGACAC
ATACGGCGAAGATGCTTTTGCTATGGAAGGGTTTCAAGGATCTTTGGTCGAGTTTATGGTCAGAGAGACTGAACAGCTCCACGCTAAGGTGGAC
AGGTACAAGAGTCCAGATGAACATCCTTTTTTCCCACAGTGCTTGCCTGACCCAATCCTTCCCCCTATTCAATACCCACAGGTTCTGCATCACT
GTGCTGATTCTATAAACATCAACAAGAAGGTGTGGAACATGTATTTCAAACACCTTCTTCCCAGGCTGGTCAATCCAGGGGACGATGGTAACTG
CGGTTCAGCTGCTGTCTGTGACACGATGTGTTTGCAGATACTTTCAAAGAGAATCCACTTCGGTAAATTTGTTGCCGAGGCCAAGTTTCTTGAG
AATCCAGCTACCTACGAAACTGCCATCCGTGAACAAGACCGGACACAACTGCTGAGGCTTCTGACTTACGAAACAGTTGAAGAAGTAATCAAGA
AAAGAGTTGAGATCAAAGCCAGGATTTTCGGTCAAGACATAACAACAATCAACGATACAGAGACTGATCCTTCGTACAAAATCAACCCTAGCTT
GGTTGCTAAACTCTATGGAGAAAGAATCATGCCCCTCACTAAGGAAGTCCAAATTGAGTACTTGCTTAGGAGGCTTGATTGATTGAAACCATTT
TTTTGTATTTTTGATCTTTTTAACTTTTATGAAACTGTAATGTGACATAAGCAGCTCAAGCTGAGTTTTATTACAGGTTTAAACAGAGAATTAA
AAAAAAAAAACAAATGAACTAATCTGAGAATAATTAAGAAAAAATAAAATAAAAATTCTTTCTGATGTTGACAGAGTTTTTTTTTGAGTACTCT
GCAATGATCTTGTAGTAGTAGCATCAGAGTTAAGCTCCTGTGGACTCTCGGACAATCTCGTAAATAGATAGAATGTTTTCAAGGGTAAGTAAGA
AGATAATGCACCATTCTAATAGATCTGATCTTCGGTTCTGCATCACCTCTTGTAGGAAATGAATGTTGTGCTCTACAAACTTTAGCTTAAAGTC
TAGATTCCAAAATCTCTGAGTAACCTCGTACTCCTCTCTTAGGTACTCATAGATCAGCGCATATCTAGCCTCTCTCCAAGCAATCTCGGATCTA
TCAAAGAGACCAACTCTGAGAATGACGTCAGCTAGATTAGAATTAGCCTTCCCAACGAGTTGGAAGAGCTTTTTCCTGTGCATTGTGAAAGTTC
CGGTTTTCTCCATCGCACGGGTTATACCAGCAAACTCTTCCACCAACTTATCAACCTGAGAAACAAAGTAATCCAACGCAATACTTTGTCCAAG
CACACTCCCAATAATACGGATGCTATTAGTATCCAAAGTTTTGAGAACAATGTAGTCAGGCCCACCTTTCATTTCCTCAGTCAACAGAGGCTTC
TCCTTAACAGCATAATCGTCTTTTCTCATTTCAGTGAGAAGGCCAGAAGCATGTCTACGAACAATGTCGAGATAAGCCTCAACGTCAGAGTCAT
CAACATTGAAAAGAACAGCAGAACCGTATTGAAAGACAACCATGAACCGACAGTTGCTCACACTCTCCCTCTCGTCCAACGTAGGGATTCCGGA
AGAGGAATCAGAGAATCTGAGAGCGATGGAGTTGGTAGAGCGAGAGGTAGGAGGAACAACATTGCACAAGTTGTCAGCTTGCATCCCCTTCAAA
TCAATACTAGTGCTGAGAAAATAGGCTTTGACGGGGATTTTGCCTTTGTCTTCCTCTTCCTTGGTTCCAAAGTCGTAGCTTTGATAAACATCGC
CCGACCCAGAGTCAGAGTCGTTGTTGTAAATCGAAATCGGAGAAGGGAACGCTGAGAAGAATCGGGAATTAAGAAAGCCAGAAGCTTTATGGAA
AACAATCGCCGGGCGTCTCCAAAGACATGGAGGCTTTGAGGAGGAATTGATTAATTGATTACGACGAAGAAGAAGAGCACCGACTGCTCTCCAT
CTACCCATTCACAGAAAATACAATAAAAAGTTGAAAAATTTCTTGTTTGGTTTTAGGTCACTCTCCTCCAAAGAATTCGACTTTATTAGATTGC
CC |
Primers for UN07604 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CCTCGCCGAATCTCTATTCT |
58.504 |
20 |
TCTCACTCTCGTCCACCCTT |
59.835 |
20 |
274 |
3 |
276 |
| 2 |
CCTCGCCGAATCTCTATTCT |
58.504 |
20 |
GTATCGGATCGGAGAAGCTG |
59.797 |
20 |
243 |
3 |
245 |
| 3 |
CCTCGCCGAATCTCTATTCT |
58.504 |
20 |
TGGGTTTGAGAAGCATAGCC |
60.214 |
20 |
109 |
3 |
111 |
|
|
