 |
Simple sequence repeat (SSR)
>UN08001
ACAATACACATGCTATATCATACAAGAAGAGATAATGCCTGATACACTAAAATACAATACGAGACTGTGTCCTCTACTCGTCTCCAAAAACAAA
CCTTATACAAAAAAATATACAACCAGGGGTTATTGTTTTACAAGTTTACAACATCTACAATTCATGAACCTACTCCTTTGTCCTGAATCCACAA
ACCAGACCATACGACGACAACTAACAAACAATCAAGTGTCTGTCGTGTCCTTGTTTCGTGGAATAGTTGTTGTACAAATATATTTTTTTAGGCT
CGTAAGTGTTGGTTTCGCAGAGATCTTCCTGTCAGCTATCCTCAGCGTTTTTTATGTCGTTGTCATTCGTTCCATCGGCTGTTTTACGTACGAA
TTGGCCACGGACACGAGGGCGTTGTTCTGCTAGTTTTTTCCGGCTTTGGTATCGTACCTTCTTTCTGAAGCACCTCTCTTTTCTCTTCTGACGG
AACTTTGTCAAAGCAGCTTCTCTTTGAGACATCTTATTTTCATCTGCCACAGTCCCGCTTCCACTGCCGCTTCCACTGCCATCACCACTTCCCC
CAGCACCATTACCACTTCCCGTATTCATCCCTCCAGCATTAATGCCATTGCTGCTTCCGTATGGATCATTGCTTCCATGACCACTTCCTGATCC
ACTTCCATTCACACTGTAATTCACTCCGTTGTTGTTACCTTCAGTCGCCTCATTTGAGGATCCACGTTTTGGCTGTAACTTCCGCTCAGGGATG
TGGGCAGGATTATAGGACGAGTGATGATGATGATGATGATGATGATGATCACAAGGTAGAGGCTGCTTTACCGATGAAGATCCTGCCGAGCTCA
CTTTTGGAGCTCCAGGCTTTGTGAAAGCTTTATTCTCAGTCGTGGAACTCATTTCAAAGTTATTGCTCCCGACGCGTGAGCGATGATTATTGGG
GAGACTCTCGGTCATGTTTAGGTGACAATCACATGCCGCTTCAGTTTTTTTCGTAAGATCTTGACAATTATTATCCTGAAGAGAATTGCTTCCC
AAGTTCCCACCAGGAGGCTTATTGTTATTTGCGGCTGGATTATACCTTGAGAAAGCTGAACCCTCTGAACGCCTCAGCACATTGCGGTCTTCTC
TAACTATTGTCCCATCATCTTTGGTTCCTCGATGCCTCTTTGAACTATGTTCAACGTCCATAAGCTCTTCAGAGTTTTTGACCGCAGCTTCCCT
GGTATCTAAAGTTTTGCAGTGTGGGTTAGGCGTCACGGGTTCTCTGTTATCTTTAAGGTGGCTAGGCATCGCTTTGAACCCCGAGCCTCCCTCT
TCATGCATTTGTTTACTTGAAGGACTTTCACTGTTGTGATCCAATGGTCCTTCCCCAACTTTCAGTTTCCATTTACTAGAGCTCTTTTCAAATG
AATTCTCCTGTCTCATAATGCCAGTGGTTTTAGTTAGGGGCTCATCTTTTGGATCCAGTGGCAGATCATCATTTCTACGAATACTAATCTCCAA
GTCTCTACCCATTGTGACATCTTCAATTTTTTCATCCTGTTCTTGAGTCTCCTTCTCAGCAGGTGCTGCAACCAAGTGATTATTGGGAAACTCG
GGGTTTGAATGTACCACTTGTGCGCATGTGCTATCAACTCGATCCCATGGAGACACCGCTCGTGGACTGTCGTCAACCTCCACAGCTTTTTTCG
TCCAAGAGCTCTGGGCACCGCTCCCATCACTGCTTGCATCACTAGCATTCAGGCCAATGCTCCCATTTTCATTCTCACCACTGTGTCCTGAATC
GTTGTCAGATTTTATAACATTCTTTGATTTCACGGACTTTTGAGTCTGGTGTGTTCCGCTTTCACTTCCACTGCCACTAGAACTTTGACATCTT
CTCCAAACATGTTGCCAAAGGATTTTGAGCTCGTTTTTCCTTATCGGCTTAACTAGAAAGTCAACTGCTCCTTTTGATAAGCATTTAAAGATCA
GCCCCATCGAGTCATGAGATGACATCATGATGACAGGAATGTTGCGGCGAGATTTGTGATTCAAAATCTTGCATAAGAC |
Primers for UN08001 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGTATTCATCCCTCCAGCAT |
59.917 |
20 |
TCATCGGTAAAGCAGCCTCT |
59.978 |
20 |
246 |
584 |
829 |
| 2 |
CGTATTCATCCCTCCAGCAT |
59.917 |
20 |
GGCAGGATCTTCATCGGTAA |
60.036 |
20 |
256 |
584 |
839 |
| 3 |
TTTTGGCTGTAACTTCCGCT |
59.883 |
20 |
AAGCTTTCACAAAGCCTGGA |
59.993 |
20 |
152 |
725 |
876 |
|
|
