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Simple sequence repeat (SSR)
>UN08170
CCTCATACGCATTTCTCTACTTTTTTTTCAAAAAATTACAGTATTTTTAATCTGTCAAGAGACACAAAATAAATTTAATATAAATATCCAATAT
AATTTTTTTGTAATAGATAAGTAACCCAAATAATTCACTTTTCAAAAAAAAAAAGAGAGTATATATCTTTTCAAAGGTGCTGCCTGATTGCTTC
ATTCTCCCTCCTTAATTAGCTTTTTGCTCTTTCGAAAAGGAAGAGGAATTTTCGCTTCCAATGGCTCTGCCAGGGGAAGAGCCTGAGTTTATGA
ACCTAAGAGAGTGGGATCGAAGAGCTCGGTTCATCCGCGAAAACCCGACTTCCAGAAGGTTCTCTGCTTCATATGTTGGCAGCTTTCGAGAAGA
TTGTCACAAGTCTTCTTCAAGAACAAACGTAAACAACATCTCAAGCACTGCCTCATCTCCTGGCTACACTCTCAAAGAAGAGATTGATCCATCA
ACATATTCATTCACTAATGCACTCAAGGCGTTACAAGCAAAGACAATGTATAATAAGATAGAATGGTTAACACAAGAAGGGTTTGCTTTGAATT
CAAAGTGGAACGAAGCAGAGAAATATATATGCAATCCATTGTCTGGAGAAGTTCCAATGGAGTGTTTGTCTTCTAAAACATTACGTGCAAGATC
TTTCAGAAACTTGACCACCATGTCTGCTCCTCTTCACTACCCTAAGCCCAATCCATTGACGAAGATTGATCAAAATAAAACCAATAATAATAAT
CATAACGTCAGAGTCATTCACGAGGATCTTTATGTTCTTGATCCTGTTCTTGTTCGAGCTGAAGAGAAAGTTGTGGGGCTGAAACTAGATGTGG
GCATTAAGAGTACCTCGGTGGATAGTAGCTCCGGTAGCCCTAGTCCGGCAGAGACGCCTCCGATCATGGAACGGTCGCTGAAAAGATATGCGGA
AGCTTATGATTCGCCGGTGGACTTCAATCTCAATATGGAAGGTCAACCAGAGGATTTAAAGTTGGCAGAGGATGAAAAGGAAGAAGAAAAGCAC
GAGATGCCTAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAAAAGAGAAGCAAGGGATGAGTAAAAAAGAAGAAGAGAAGCAAGAGATGATAAAAG
GAAAAGTAGAAAAAGAGCAAGAGACGAGTGAAGAAGGAGAAAAACAAATGGAGAAAAATAAGAAGAGAGGAAGTGGATGCTTCCCATGGATGAG
ATCAAGACAAGGACAAGCAAGAAAATCAAAGTACATTTTCCCGATTTGTATTCCTCATCTTGTCAAAGGTTGTTAAAAATCACCTTAAAACACA
CAAGAGAATCAACAAAAAAACA |
Primers for UN08170 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAAGAAAAGCACGAGATGCC |
59.962 |
20 |
GGGAAGCATCCACTTCCTCT |
60.596 |
20 |
191 |
1023 |
1213 |
2 |
GAAGAAAAGCACGAGATGCC |
59.962 |
20 |
ATCTCATCCATGGGAAGCAT |
59.321 |
20 |
202 |
1023 |
1224 |
3 |
GAAGAAAAGCACGAGATGCC |
59.962 |
20 |
ATGGGAAGCATCCACTTCCT |
60.853 |
20 |
193 |
1023 |
1215 |
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