 |
Simple sequence repeat (SSR)
>UN08330
TTTAGAGATTTAAAATTTAAATCTAAAACTGAGATTTGCATTTTGTAATAACATAGAGATTCGATATAGAACTAGAACAGGTTTTAAGAGTTTA
AATCAAACATTACTTAAACAAAGAAGCCATGAGAACGAGACAATAGAAGAACGAACATGGACTGATACTAGATGTGTAATTCCTTGAAGGTCAA
GTTTTCTTTCTTCATGGTTTCCAGAGGATTGTGGTTTCAGCAATCATGGAGGTCACAGTGTACGGATCCATGTTGGACGCTGGCCTACGATCTT
CAAAGTATCCTTTCCCAGCTTGCTCAGTGTCGCGACCAACCCTAATGGATGCCCCACGGTTGGCCACACCCCATAAGAAAGTGTTGATATCGGC
GGTCTCGTGTTTGCCAGTGAGACGACGCTCGTTGCCTTCACCATAAGCAGAGATGTGTTCCTTGTGACGCAATCCAAGCTTCTCTATCGCTTTC
TTTATCACTTCATACCCTCCATCTTCTCTCATCGATTTTGTACTGTAATTTGTGTGTGCTCCTGCACCATTCCAATCTCCCGGAATTGGTTTAG
GGTCAAGAGACAGAACGACTCCAGCCAACTCTGTGATCCTCTCGAGGATGTAACGAGCGACCCAGACCTGATCAGCGGCAGCGATTCCAACGGT
TGGACCGACTTGGAACTCCCACTGGCCTGGCATGACTTCTCCGTTAGTGCCACTGACATTGATTCCAGCGTAAAGACAGGCTTTGTAATGAGAA
TCTACTATGTCTCTTCCAAAGGCTTTGTCTGCTCCAACTCCGCAGTAGTACGGTCCCTGAGAACCTGGGAAGCCGCCGACAGGCCAACCTACCG
GCCATTTAATATCCTTTTGTAGCAAAGTATACTCTTGCTCAATTCCATACCATGTTTCTTCGGCGGCAACGCTGGGATCGCTAAAGATCTTGGC
CGCAGCATGCCTTTTGTTCGTCGGGATCGGTTCACCGGCAGGTGTATATGCGTCACACATCACAAGGATGTTGTTGCCTCTTCTGAAGGGGTCT
TTGAAGATAGCTTGAGGGTAAATGATGACTTCACTGTCATCGCCGGGAGCTTGGCCAGTGCTTGAACCGTCATAGTTCCATTTCGGTAACTCCG
ATGGATCCTTGACAGGTCCCGGCAAAGTCCTTGCTTTGCTTCTCATATCCAAGCCTGATCCACCAATCCATATGTACTCCGCAATGATCTTCTC
GGAAGAATCGGAGAGATCAAGATTGATCAAATCTGCAAGTGCCGACATTTTTTTTAGGAATCTTAAAAAAATAATTAGCTTTGTTTTGTATAAC
ACTAAAGAGATTCCTGCAAGTGTATATATAGCGAGAGAGAGAGAGAGAGAGAGAATGGTAGGTGTGTGCTTGACTATGCTATGAAAAATGATTT
TGGTTAAAACTGAGAATACGGAAAATATCTGGCTATTATTGGAAATGCGAATCATCTGGAGATTCAGGTTGATTCTCGAGTTATAAGATTCAAA
TTTGCAGAATCTTTTTCAAAACAAAAGTTAATGACCTGATGTCCCGATAAAGTTAAAGTATCTCACCTAATCAAAATTTGATGTGTTACAAAAA
CTATGGAATATGCATGTATTCAAAAATAATAAACAGTTTGTTGATATGGGAGGTTAATAAATTAGTTTCTTTCACTAAATCTTTATTAACAAGG
AAATCGGGAATATATTTCTGAGATTTCTTGGAAATGTTTGTTCTCATGTGAATGCAAACCAAATTAAAAAAAAAATGAAGAATTTTTTTGTGTG
TGCCACAAAAGAGTTTCC |
Primers for UN08330 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCTCGGAAGAATCGGAGAGA |
60.027 |
20 |
CAGATGATTCGCATTTCCAA |
59.622 |
20 |
250 |
1219 |
1468 |
| 2 |
TGATCAAATCTGCAAGTGCC |
59.805 |
20 |
CAGATGATTCGCATTTCCAA |
59.622 |
20 |
223 |
1246 |
1468 |
| 3 |
CGGAAGAATCGGAGAGATCA |
60.295 |
20 |
CAGATGATTCGCATTTCCAA |
59.622 |
20 |
247 |
1222 |
1468 |
|
|
