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Simple sequence repeat (SSR)
>UN08346
AAGAAAATCCAAAAGACATTCAAATGAACACATACAAAAAGACTCAAATCCTCCAAATTTTCTAATTGAATGAAATGGTCATCAAGAAAACATG
CTTTGTATCTCTTATACAAATCGAAACAACAACAACTGATCGCTCATCCGGTATACAACATCAACAACAACAACAACAAACATTTCTTAGGTAG
AGGAAGAGACTCCTCCTTTGGAAGAGGAAGTCACACCTCTGCAACCAGCACCTTCATGCCATTCAAGCATGATCTCAATCTCACCGCACTCGAC
ATTGTTAAGCCTAAGGAGCATGTCTTGCGTGATCTTACCATTGTTCCAAACAATGCTACTTTCATCTGATAAACAATTCTGCCTTGATGGCTGA
ACCCTTTTGATAGCGCATCCATTAGGGAGCCTCAAAAGCTCCATCCCCATTTTGAGAGCCTCTAAGTATGTTTGAATGTCTACGTTTGCATCTC
CCATCTTGTCATCTCCAGTGAACTTGTCCCAGTCAAACACTGTCAAACGGATAGGGACATTGGGATCTTTGATTGCGACAGTCATTTCTTCATT
CCATACTGGATTGCAGTTTTTCTTTATCACACGTGTTTTCAATGTCTGATCGGCGACGGTAATGACAACATACGGATCGCTGCTTCTGTGGTCG
CGAATGGCGAGATTGATACCTCTTTTGACGTGAATCGTTAGCAATCCAAGAGGTCTTTGGTCCATTGATTTGGCAAGATTTGAGAAGGTTGACC
AAGTTTGGAGAAAATGAGGAAGAACCC |
Primers for UN08346 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AACTGATCGCTCATCCGGTA |
60.624 |
20 |
CACGCAAGACATGCTCCTTA |
60.011 |
20 |
186 |
128 |
313 |
| 2 |
AACTGATCGCTCATCCGGTA |
60.624 |
20 |
GCAAGACATGCTCCTTAGGC |
59.985 |
20 |
183 |
128 |
310 |
| 3 |
AACTGATCGCTCATCCGGTA |
60.624 |
20 |
GCCATCAAGGCAGAATTGTT |
60.081 |
20 |
246 |
128 |
373 |
|
|
