 |
Simple sequence repeat (SSR)
>UN08535
GAAAAAAGGATTATTATGTGTTTACCACAAGCCAAATAAAAAAGAGAAGCCGATTCAACTTTTTAGCATCCTATTGTTTTAACAATACCAAATT
AAGAAATCACACATTACTATATTATCGACCTAACGAGTGAAAAATACAACACCCAAAAAAACTAAGAGCTTAACACGCATTCAAAGGGGATGTG
TAATAAGTACACTATTTTCGTGACTTTTTACTCCCAACATGTATACAAACACAAAACACGAAAATAAGAACAAATAATTTTTAATAAACTCCAC
AAAAGCATTAGATTATATATATGCTGGCTAGATCTCTCAAAGGCGGTGGTGTAAAGCAGAAACCGGAGCATGAGTGGCGGCAGCTGGAACCGGT
GATTTACATTGGTAACACTTAGCAAAGAGACCAAAAGTATCGACTTGACGAACAAAGTTGGTTACACTTGCCCATCCACCAAACCCGAATCCGA
CTATTAGAACCCATATCACCACGAAAGCATTCAACACGTACATCGCCGTCCAGCTTGGCATGAAGAACGGTGGCTTTTCCGCCGCATTCTGACG
AGCTGAGGCAGATCGGTAAGTGAGCATGTGAGCAAGGGACGGGATGATATAGACGGTGAAGCTAACCAGAAGAGCACCAACCGCTGAATTGATC
GGACCAAAGAACGGGAAGATAATAGCTAAGAACCATATCGGTATAACCACAGGCAATCGAGCTAAAGCCCTCAAGAAAATGCTTTTTGTGTCAT
GCATCCCTATCACTTTCTCCCACACAAAGTAGAGCGGGGTACACGCGAATCCAAACGTTATAAATTGGTGAATGAGCATGAGGATAACGGCAGC
GTCACGCCACCCGTTCTTGGGGAGAAGAGAAAAAGCATTAGAGTGGTTGAGAAGTGCGTCTCCGAAGGCCCAGTAAACGGCGGAAGCTGACGGA
ATCGTTAGTGTGAAAACGTATAACGTCGCCATCAAGTAAATGTACTTAAACTTCTGTGGTTTCCACATTGCATGCATTATCTCAACAGTAACTG
CGTGACCACCAAAGGTATACAAGATATTGGTAGCTCCCGTAAAATAAAGCACTAGCTTTGTTGGACCAGTGTGCTTCACACCTTCCGTCTGGCC
GTGGATAATGGAGGCGATGGCCAAGTACCATGCCGTGTAGGTGGTCATACCCAAGCCGAGGAATGACCAGATTCGATAATTATGGAACGACGGT
ATAAAGACAGTGGTTGCACAACACGCGCCGAATATGTAAGTCCATGTTCTCTTGTCCAAGTGATCGTTTATGTAATAAATGTTACTGGCACAAG
CAATGAGTTGGATTACAGATCCAAACAAGAGGAAAGTGCAGTTAAATGCGAGGCCTACTGCTTTCCAGTATGTGCCGAGTAACCCATCGAGTAC
TTCGAACCACTGAATAACGTGGTTTTTGAAGTTTTTGCCTTCTTTCTCCTTACGAGCTCGATACTCAACGTAGAGAACACTGATGAGGTAAGCA
GTCCAGCTTCCGAGTAAGCCGTAAAAGATCTGAAGTACTATTCCTGATAACATCCCTAGTTGACTGAACGAGTACGGTAGTGTCAGAAGCACTT
GCGCCACCTGGTTAGATGCGCAGCTGAACCAAGCGTCCCAGACAGAGCCACCGTGCCAGAGAAAGTTGCTTAGTGCAGAACCGGTGGAGGGGTC
GTATTCTTCGGTTTTTCCGGTGTGGTTACCGTTATTCTGATCTCCGTCGTGGTCATTTCCACTAGCTACTATTGCTTCTTCTCCCGCCGACATT
TTTGCTTTCTCTATGATTTGCCTCTACTAGATCTGTGTGTGTGAGAGAGAGATCAGGGTGTTTTTCTCTTTTAAAGAAGAAGAAGGTGAGAACA
AATCAGAAGCAAACAAAGACCACAACTGATTTAAGTTACACTTGTTCCTCTTTTTCTCTTTAAATGAATATTTACTCTCTCTGTCTTTGGCAGA
GAAGAGAACGCAGAAGATGGCAGAGAAGGAGAGAGAGAGAGTTCTTTGATCTGAGCAAAAGAAGGAACGAAAGCT |
Primers for UN08535 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GCCGACATTTTTGCTTTCTC |
59.829 |
20 |
GCTTTCGTTCCTTCTTTTGC |
59.091 |
20 |
271 |
1778 |
2048 |
| 2 |
GCCGACATTTTTGCTTTCTC |
59.829 |
20 |
GCTTTCGTTCCTTCTTTTGCT |
60.014 |
21 |
271 |
1778 |
2048 |
| 3 |
GCCGACATTTTTGCTTTCTC |
59.829 |
20 |
AGCTTTCGTTCCTTCTTTTGC |
60.014 |
21 |
272 |
1778 |
2049 |
|
|
