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Simple sequence repeat (SSR)
>UN08565
CCGGGCTCCTTTGGACAGCAGTACGGCGGATTGGGCCGTGGAACCGTCGGAATGTCGGAAGCGGGTTCGAATCCAAGTGTCCCCCCGCAGGGTA
GGATGATGCAAGGCACTTAGGGAATGATGGGGACGATTGGGTCAGGCTCTCAAATGCGGCCAAGTGGAATAATGCCTCAGCACCAGCAGAGACC
GGGTCAAGCCTCTCTAAGACCAGCTTCCTCTCCGAGTAGTCCATCTCCTGTTCCTCAAAACTTTCAAGCGCATGGCCTTATGAGACCTTCATCT
ATTGGTTCTCCTGGTGTCCAATCTACTGGTGCAGCACAGCACAGCTTGCAAGCCACTAATCAACCATGGTTATCATCTTCTGCCCAAGGGAAGC
CGCCTTTGGCACCTCCTTCTTATAGACCGCAAGTAAATAATAATCCCTCCTCCATGCAACAAAGATCGCACGTTACTCAGCAGCATCTTTCCAC
GTCACCAGCGACTTCACAGCCTCAGCAACAGCAACAACAACAACAACATCAGCTTCAGCCTCAAGAGCAACATCAACAATTGAGACCTCCGCAT
CAGACTTTACCTTACTCACATCAACCGGCCCGGGTCCAAGGGTTGGTAAATCAGAAAGCTGCTTCTCCAGCAATGCCGAGCCCGCCCCCTGTGC
CTCAACCAGGAAGCCAAGCTAAGCCAGTTTCAGTAGAGAATGAGGAGTCTGATGATCGTATCCTGGGGAAAAGAAGCATCCATGAGCTACTTCA
ACAGATTGATCCGTCAGAGAAATTGGATCCAGAGGTTGAAGGCATCCTTGCTGATATTGCTGAAGACTTTGTGGAGTCAATCACAACTTTTGGA
TGTTCTTTAGCCAAGCATAGAAAGTTTGATACTCTAGAGGCCAAAGACATCTTGCTCCATGTTGAAAGAAACTGGAATATCAGGCCTCCTGGTT
TTAGCAGTGACGAGATCAAGACATTTCGAAAGCCACTGGCAACAGATATTCACAAAGAGAGACTTGCCGCTGTAAAGAAGTCTGTGACGGTAAC
GGAAGCATCAAACGCCAGGAATCCGTTTGGGCATGGAACAGCTAATGCAAGAGGAGGAGGCCAGGCAAAGACGCCTGCTAATCCCTTGGCCTCT
ACAACTTTTAATCACTGATTGTATTAGATTTAACCCTTCAGTCTTGTTTGATAGGAAATTTTCCATTTAAAAGGTTAAGAACTTCTGTAAAAAG
GTTCCAGCCTAGATTTTATATTCGAACCATAAGTAAAGTATCTTATCGGCTTATGGGATTGAACCGAGTCTGATGTTTTTGCAAAGCACAACAA
ACATGTACTAATAGAAGAACAAGAGATGAGAAGTGGGTATGAATCCAGACTAGCCGGTATCATTAAACAGATTCTTCTGATACAGATGAAGCTT
CCATAGCTCTGGATCCATTTCTCGCTTCTTATTAGTATCTTAGCCTTCAACGATCTTCACTGGCGTCCCGAAAGGACTCTGCTTGATTGATAAG
AGCTCAATGTCAAGCTCGATTGTTGCGTTAGGAGGAATCTCTTGCACTCCTTTCTTTCCGTAAGCAAGCTCCGGAGGAACAATCACCAGTCTCT
GACCGCCTACATGCATCCCTTCAACGCCAAGGTCGAGTCCTTTGAGAACATTCCCGTTCTCTGATTGTCCAATGTCAAACCCGTAAGGCGTTCC
ACCTCCAACGCCAAGTCCTTGTCGACTTGTCATGAACGTTATCCCTTTCCATTTTGCAACATAGTGGACTGCGACCCGAGATCCTTTCACAGCC
TCTGCTCCATTGCCAACTTTTATATCATAGTACTTGAGACCATTGGGGAGAGTAGTAAACTCGCTGTCAGGTATCTTAGATGCACGTAGAGCTC
TTCTACTGGTGCTTACGGCCTCGGATGAATCAGTTAACAGAATCCCAGACGCAGCGGAGAGGAGACATCCAAGTAAAACTCTTCTTCCTTCGTA
GCTCACCGGTGGCGCCGGAGAAACAACGGTCTCTGGTCTGATGATCTTTTCGCCGCCGGGAGACGGTAACGAGCACCGGTAAGATTTGGATTGC
CTTCTTCTTGATTGAAAAGGAATGGAGGAAGAGAGAGAATGATGGAGAGGATGAAGAAGTTTCATTGGTAAGATCATTGTTGTGTCTGATGAGT
GAAAGAAGCTTGCTTCTTCTTCTTCTGAGTTTGAGCTTCAGTTGTGTTGTCC |
Primers for UN08565 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TAATCCCTCCTCCATGCAAC |
59.894 |
20 |
ATTTACCAACCCTTGGACCC |
59.919 |
20 |
199 |
417 |
615 |
| 2 |
GCAACAAAGATCGCACGTTA |
59.879 |
20 |
ATTTACCAACCCTTGGACCC |
59.919 |
20 |
184 |
432 |
615 |
| 3 |
GCAACAAAGATCGCACGTTA |
59.879 |
20 |
TGATGTTGCTCTTGAGGCTG |
60.136 |
20 |
114 |
432 |
545 |
|
|
