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Simple sequence repeat (SSR)
>UN08717
GGACAAATATCTTTTCTTTATAGCATTTCTAGATTTACAGAAGCTTCCTTCAGATTCACAATCTCATCAAGCACACACAAACCCTTTCAAAATG
ATCTAAAGAAGAAACAAGAACCCTACTATACAATCAAATCACAACCAACCCAGAAAGCAAAAGTTTCCTCTTTTACTTTCTTCTCTTAACTCTT
TTCTTCCTCTTGTTCTTGAGGAAACTAGGGTTTGATTTTATTCTCCAAAAGAAAAGGTCTTTCATCCAAAAAAAGCAAAACCCAGCTCGTGTTT
GTGTGTGTGTGTGTGTGTCTGTATATAGATAAACATTTACATCCCCTAATAAGGTTACATATCAAAATGGGAAGGGGAAGAGTAGAGCTAAAGA
GGATAGAGAACAAGATTAACAGACAAGTAACGTTTGCTAAGCGTAGGAACGGTTTGCTGAAAAAAGCTTATGAGCTTTCTGTTCTCTGCGATGC
TGAGGTTTCTCTCATCGTCTTCTCCAACCGTGGCAAGCTCTATGAATTCTGCAGCACCTCCAACATGCTCAAGACACTGGACAGATACCAGAAG
TGTAGTTATGGTTCAATTGAAGTCAACAACAAACCTGCCAAAGAACTCGAGAATAGCTACAGAGAGTATTTGAAGCTGAAAGGTAGATATGAAA
ATCTGCAACTTCAGCAGAGAAATTTACTTGGAGAAGACCTTGGACCTTTGAACTCAAAAGAGCTAGAGCAGCTTGAGCGTCAACTAGACGGCTC
TCTGAAGCAAGTTCGCTGCATCAAGACACAGTATATGCTTGACCAGCTCACTGACCTCCAAGGCAAAGAGCATATGTTGCTTGAAGCCAATAGA
GCTTTGTCAATGAAGCTGGAAGATATGATAGGCATGAGAAGTCACCACGTAGGAGGGACATGGGAAGGCGGTGATCAGCAAAATGTTGCCTATG
GACATCATCAGACTCAATCTCAGGGACTGTTCCAGTCTCTTGAATGTGATTCCACTTTGCAAATTGGGTACAACCATCCAGTGTGTTCAGAGCA
AATGGCTGTAACGACTCAAGGTCAGATCCAACCAGGAAACGGTTACATCCCTGGCTGGATGCTTTGAGTGATGCATGCTTCTGATCTAATGATG
AGAACAAGCTGGATCTTTAAGCGTTCAAGTGGTGGGTTCTTGATGATGAAAATGAGATTTGGATTATATTAGTACGGAATTTAATGAATTGTGT
TTATGTAATGACATAAGTGGCTATATATAGTTGTGATAGCCTTCAACACCACTCTTCTGTTGCAGAA |
Primers for UN08717 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
ACAACCAACCCAGAAAGCAA |
60.529 |
20 |
CTTCCCCTTCCCATTTTGAT |
60.124 |
20 |
228 |
135 |
362 |
| 2 |
CAAATCACAACCAACCCAGA |
59.389 |
20 |
CTTCCCCTTCCCATTTTGAT |
60.124 |
20 |
234 |
129 |
362 |
| 3 |
TCAAATCACAACCAACCCAG |
59.389 |
20 |
CTTCCCCTTCCCATTTTGAT |
60.124 |
20 |
235 |
128 |
362 |
|
|
