Simple sequence repeat (SSR)
>UN08800
GGGATCGTGGGTTTCATCTTCGTAGTCGCCTTCGAATTCGCAGAGAGAGAGAGAGGAAAAGAATGAAGGTGAGATCATCTGTGAAGAAGTTGTG
TGAGTTTTGTAAGACAGTGAAACGCCGTCGACGTGTCTATGTTATTTGTTCGTCCAATCCTAAGCACAAGCAAAGGCAGGGATTCTGCTCCATT
GCTCATGATGGAATCATTCCTCCTCCCTTGTTTTCGGAGTCGGTTGCTAATCAGGAGGTGGTGAGGATGCCTGGCCAGGGAGTATCAGCTGGTC
TCGCATCGCTCTTACACAAAAGGCCTGAGCCAGCAGCGGTTTTCGGATGGAGGTCAGGTCTTGCATCAATTCTCTTCAAGCAAGGGAATTAGCA
AAGTTAAAACCAGCATTTAATATTTTGCATTTTCTCAAGTTGTAATCCAAAGTTTGGTTCTCAACACATTTACTTTGGTCAGTTGTAGGCTCTT
CTAGACCCCGTTTGATTTGCTTGCCCTTATATCTTGAATAAAGAGATAATATTAAACTTGAGTATTTTACTTTTTTTAGATTTTCCAGTGAAGC
|
Primers for UN08800 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GATCGTGGGTTTCATCTTCG |
60.461 |
20 |
CATCCTCACCACCTCCTGAT |
59.92 |
20 |
255 |
3 |
257 |
| 2 |
GATCGTGGGTTTCATCTTCG |
60.461 |
20 |
CGGCGTTTCACTGTCTTACA |
59.904 |
20 |
119 |
3 |
121 |
| 3 |
ATCGTGGGTTTCATCTTCGT |
59.41 |
20 |
CATCCTCACCACCTCCTGAT |
59.92 |
20 |
254 |
4 |
257 |
|
|
