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Simple sequence repeat (SSR)
>UN08900
GGAATTGTGTAGTAGTACACACTCTCAGAAATCATTTAGATCGAAACCTCTCTCTCTGTTGCAGAAATGGCGGCAGCTTTAGCTTCCAGACTTA
CCAAAGGACGTTCGTTGCTTGGAGGTCTTACCAATGCTTTCTCTGGTCTTGATGAGTTCATCCAGTGGAAGCATCCTTTCTCAGCAGCAGCAGC
AGCAACAGGAGGACGTTCATTCAAATGGGAACAAGACTCAGAGTCGTGGATAACTCTGGTGCAAAGGAGGTGATGTGCATTCAATCTCTAAGGG
GAAAGAAAGGAGCAAGACTTGGCGATATCGTCATTTGTTCAGTGAAAGAGTCTGCGCAAAAAGTTGATGTGAAGAAAGGGAAAGACGCCATACA
GAAAGGCAAAGTGAAGAAAGGGAGCGTCGTGTACGGTGTGGTTGTGCGTGCTGCGATGCAGAAAGGGCGTGTCGATGGAAGCCAAGTAAGGTTT
GATGACAACGCCGTCGTTATTTTGGGGATTAAGGAGAAAAAGACAGATGAAAAGGGTAAGGAAAAAAAGCAGAACTATAAGGGTGGTTTTAACC
AACCGCTTGGTACCCGAGTGTTTGGTCCTGTCCCTCACGAGATGCGCCTCAAGAAACAGCTCAAGATCCTTTCTTTGGCTCAGCATCTTGTTTG
AGACTGAGAGAGACTACACCACCTATCATCTTGTTTGAGACTGAGACTACACCACCTATTATTATCTCTTTATTATATTATGCGACTGTAATCC
ATTCATCAGATAGTCAGACTTCTGTTTTATTAATTAAACTATTTGACATTTTTTATTCCCAACTCTTAACGTCTCTCAGGCAATTAGTTTTCAG
TCTT |
Primers for UN08900 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGTTGCTTGGAGGTCTTACC |
59.734 |
20 |
TATCGCCAAGTCTTGCTCCT |
59.978 |
20 |
203 |
107 |
309 |
2 |
CGTTGCTTGGAGGTCTTACC |
59.734 |
20 |
TTCTGTATGGCGTCTTTCCC |
60.074 |
20 |
273 |
107 |
379 |
3 |
CGTTGCTTGGAGGTCTTACC |
59.734 |
20 |
ATGGCGTCTTTCCCTTTCTT |
60.074 |
20 |
267 |
107 |
373 |
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