Simple sequence repeat (SSR)
>UN08901
GGGTTGCTATCGAATCGATCGTTAGGTCTTACTCTTAATTGATTGAAAGGCTTGCTTAGATAGATAGATAGATAGAAATGGCGTTTTTGCTAAA
CAATACCTCGATTGCATCTCACCTCCGATCTTCTTCCCAGAAGCCGGATGGCGTCTTAGCTCAATCCCGTCGTGGGTTCCATGTTGAGCTAGGA
ACTCGCGAGAAAGATCTGTTAGCTGAGAATGATGCTTTGAGGAGATTCAAGTCGCATAAGAAAGGAGTACGCCAGTTGAAAAGGGTCGGAGATG
TTCTCACTCTTGTCGTTCTTGCTGGGTGCTGCTATGAGATCTATGCGAGAGCAACATTGCAAAAGGAAGATTAAGCTGCTGCAGCAGTAAGGCT
CATGAGTTTGGTCATCATCCTTCCTTCTTCCTCTTTTTTTTTTTTTTAGTAAATCTCAAAAGTTCATGTTGGCTTTTGCTCTGAATAAGTGAAT
AAACCAAAAAGGATTTGGTGTTTTTGTTTCCTTGTATTTGTTGTTTTTTTTCGAGAAACCCAAATCGCTATTGATGGAATAAAGCAACGCAGTT
ATGATTTG |
Primers for UN08901 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
TCGAATCGATCGTTAGGTCTT |
58.801 |
21 |
GATCGGAGGTGAGATGCAAT |
60.042 |
20 |
115 |
10 |
124 |
| 2 |
TCGAATCGATCGTTAGGTCTT |
58.801 |
21 |
GACCCTTTTCAACTGGCGTA |
60.11 |
20 |
266 |
10 |
275 |
| 3 |
TCGAATCGATCGTTAGGTCTT |
58.801 |
21 |
TTCTCGCGAGTTCCTAGCTC |
59.859 |
20 |
190 |
10 |
199 |
|
|
