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Simple sequence repeat (SSR)
>UN08965
AACATGGAGACATTCTTTATCCTCACAAAAGTTGGAAATTCGATTTGAACAAACAATAGCGTAACATTTGTGTTCCCAGATGGAAAAGATGCGT
GGAAACTAAGGAAATACAACAACAACAACAACAACAACAAGTCACTTCCGACCACACAACTCATCAGTCATCAATCATCATCATATATATGATC
ATATCTTTCCCCAAACCACATTCTTTTTTTTTTGTATAAACAAAACAAAAGTAAAACGTAGGATTAGTCAAGATGGGACTACTACCAACTCCAT
TACAATACCAGTCAAGCTTTCTTCCTTTTTTTTTTCTTGTGTCAGTGAGAGTGAGCCTCGTGTCCCTCCCGGTGGGGGAAAATGGAGTTAAGGA
TCTTGGGTTTGGTGGGCTTTGACTGTTGTAGATGAAAGCAGCTCCATGGAACTGAGGCAGAACCAACCAAGCGACGAACACAAGTTTGACCGAG
TACCAAATAGGAATCCACTCAAGAAGAGATTGTAGAATCAGCTCCGTGAGCGTCAGGAACGAGTATATGATCCAGTAGGATAGCCACTGTTCAT
CGTCTACTTTCGTTGCGGTCTCCATAGCTACCACCGATGCGTACAGTGGATATACTAACATCACCACAGGCCCAGCGCCTGTATGAAGAGCAGT
GAGTAAAGTCCAGAACTTGGTCATTTTTCTCTTATAAAATAAAATAAAATTCAGAAGCTACTAAAATCTGGAAGAGTGAGAGAAACAGAGAGAC
AACTCTGCGAAATTGTCC |
Primers for UN08965 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TTCCCAGATGGAAAAGATGC |
60.014 |
20 |
GAATGTGGTTTGGGGAAAGA |
59.767 |
20 |
139 |
73 |
211 |
2 |
TTCCCAGATGGAAAAGATGC |
60.014 |
20 |
CACGAGGCTCACTCTCACTG |
59.757 |
20 |
272 |
73 |
344 |
3 |
ATGGAAAAGATGCGTGGAAA |
60.448 |
20 |
GAATGTGGTTTGGGGAAAGA |
59.767 |
20 |
132 |
80 |
211 |
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