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Simple sequence repeat (SSR)
>UN08968
TTTTCGCAAGAAAGATTTAAATTAGATAAAGCTTGTCAAGCAGTAGTTATACGTGTAAACAAACGACTGTGAAAACCAAACCCATAGGATAAGG
CCAAAAGAGGCAGCAAAACATCCAGGCCTAACGACAAATAAACGACCGTGAAAACATTAGGAATATTTTAAAGTTCTTATCCAGCTAAGGATTC
TTGATCTGCAGTTTTACAAGAAACATGCACAACTTAAAAGAAAAGTAACATACGTTACTTAAAAGATCTCCAGTGTTTTTAAAGGTTTCTCAAC
ACTAAGCAGCTCTAGCTGAGTGAGAAGAAAAGCTCCACGATACTAGATCTTGGAATAAAGCAATTAGATCTCTGACATCCTCACTCTCTCTCAT
CTCCTGAAGCCATAATAGCTCATCGAATCTCTCCACACCCACTATTTCTTCCTCACCATGGCTCCTGGACTCTTCTGATCTGCTTCTTTCCTTT
ATCACCTTCCTTCTCTGGTCATGATCTGCCATTCTTCAACATAAAAGGAGAGAGAGAGAGATGATACAAGTCAAAAATAAACAGAGGAGATCCC
AAGAGACAGATAGAAGAGATGAACAGAAGAAAAATATTCTACTCCTTGGAGAGAGATAACTGTTGACCGATCCCAGAGATGCAGAGAGGAAAGC
CATAGTTGCCACTAAGAGTTGTTGACTGCATTTCTTTTCTCTGTAGATTCAGTTTAAAAATCTTGAATTTCAAGAGAAGTAAGGAAAGAGAAAA
AAGGGCAAGATCTTGAATTGTGTAAGGATTCAGGAGGGTCTAAAATTCC |
Primers for UN08968 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
CGAATCTCTCCACACCCACT |
60.112 |
20 |
TGGCTTTCCTCTCTGCATCT |
60.096 |
20 |
261 |
400 |
660 |
2 |
CGAATCTCTCCACACCCACT |
60.112 |
20 |
CTCTGGGATCGGTCAACAGT |
60.112 |
20 |
243 |
400 |
642 |
3 |
TTTCTTCCTCACCATGGCTC |
60.195 |
20 |
TGGCTTTCCTCTCTGCATCT |
60.096 |
20 |
240 |
421 |
660 |
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