Simple sequence repeat (SSR)
>UN09004
GGACCTATTAAAAAGGAAAGCGTGAAGTGAAGCAGTAAAACCTAAAACTCCCAAGCGAGAAAAAATATATAGAGAGAGAGAGAGAAACAAAGTT
TAGAGGTTTAAGTGCTTAGCTCAAGATGATCATCCCTGTTCGCTGCTTTACCTGTGGAAAAGTGATTGGAAACAAGTGGGATGCGTATCTTGAT
CTTCTCCAGCTTGACTACACTGAAGGGGATGCACTTGATGCGCTCAACTTGGTTAGATACTGCTGCAGGCGTATGCTTATGACTCACGTTGATC
TTATCGAGAAGCTTCTCAACTACAACACTCTGGAAAAATCCGACAACAGTTGATAAAGAGTGGATGCAAATCTGTTGAAAGAGTGTTGTTACTC
GTCAGACGGCTTATATATTTATGAAATATGTATGAAACTCTAGTGTGTTTGGTGTAGAAACTTAATCAATCTGAATCATGTTGGTTTTAGACTA
CGTCAGGGATTTTATCATATGTATGTCGGTGTCTCTACGTGTTATGCTTTTCTGAGCTGAAAGATTTGTACTTCTAAGTAATTCGTCTTTCACC
AGTTCGTATACCC |
Primers for UN09004 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGGAAAGCGTGAAGTGAAGC |
59.621 |
20 |
CACAGGTAAAGCAGCGAACA |
60.05 |
20 |
137 |
14 |
150 |
| 2 |
AGGAAAGCGTGAAGTGAAGC |
59.621 |
20 |
GCATCCCACTTGTTTCCAAT |
59.797 |
20 |
165 |
14 |
178 |
| 3 |
CCTAAAACTCCCAAGCGAGA |
59.448 |
20 |
CACAGGTAAAGCAGCGAACA |
60.05 |
20 |
110 |
41 |
150 |
|
|
