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Simple sequence repeat (SSR)
>UN09017
GGGAGGAATAAAAAACATAGGTGAGTCAAGAGTCTTGAGACATCGATTGTTTGTCCGTTTTAACAAGAGAAACAGAGAAAATTTGTCTGTAGAA
AACAGAGGAAAGGGTTGAAGATGGAGGAACTTGCGGGGCTTCTGAGGATCCGAGTGAAGAAAGGGATCAATCTTGCTAGACGTGACTCTCTAAG
CAGCGACCCTTTTGTCATCATAACCATGGGAACACAGAAACTGAAGGGTCGTGCTGTGGAAAACAACTGCAACCCTGAGTGGAACGAGGAGTTA
ACACTTGCCATCAAACATCCCAATGAACATGTGATTCTGACTGTGTATGATAAAGATACATTCACATCTCACGACAAGATGGGAGATGCGCAGA
TCGACATCAAGCCGTTTCTAGAGGTTCATAAACTTGGTTTGCAAGAACTTCCTGATGGGACGGTGATCAAGAGTGTTTTGCCCACCAAAGAAAA
CTGCTTGTCTGAAGAGAGCAGAATCGTCTACCATAATGGCAAGATCGTGCAGGACATGATTCTTGTCTTGAGGAATGTTGAATGCGGTGAAGTG
GAGATTCAGCTTGAATGGATTGAAATTCCAGGTGGTAGGGGACTCTGAGAAACACATATGAGATGTTTTCATGATTCCTCTATCTCTATGTGTG
TGTGTGTGTGTTTGTAATAAAAGCCACAGGTTCTGTAATAAGACAACAGGTTCTAGCTCATGCACAAGAATATATATATTTGTAGTATCTACCT
GAAAATGTATTTGCAAAGTTGTTGTACCAAACACATGTTAGCTTTACCAGCTAGGTATTAATTACAAAAGAGAATCAAGAAG |
Primers for UN09017 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GTTTTGCCCACCAAAGAAAA |
59.953 |
20 |
TGCATGAGCTAGAACCTGTTG |
59.087 |
21 |
272 |
451 |
722 |
2 |
TTTTGCCCACCAAAGAAAAC |
59.953 |
20 |
TGCATGAGCTAGAACCTGTTG |
59.087 |
21 |
271 |
452 |
722 |
3 |
AATTCCAGGTGGTAGGGGAC |
60.052 |
20 |
TGCATGAGCTAGAACCTGTTG |
59.087 |
21 |
135 |
588 |
722 |
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