|
Simple sequence repeat (SSR)
>UN09100
GGATCGCACTCTCTCTCTCAAAATCTTATCATCCTATCTCTCTGTACACAATGGACAACAAATCAACAAAGACTGAGAGAAGAAGAAGCAATCT
CTTTTCTCAAAAAAAAAGAAGAAGGAGCAATCTCACTATCACAATATCTCTCGCACAAGAAGAAGAAGAAGAATATGTCATGAAGAAGCAGAGA
TGGAGAGGGAGCTTCGGTGTGGCTCTACCTCATCTCGTCGCCACCTCTCTTCACTTCGTCTCCAATCATCAAGTTCTTCTCAGCCTCTCTTTGC
CATGAACCTCGCCGGTCAAGATCTCTCTCTCTCTCTCTCTCTCTCTCTGATTTTGTATTGTTTTTGGTAAAGTTAGGTGGGTGTTCGTGAGCTT
CAAGACAGGTACGACGTCGTGGTGCGGGGGTGTTGCTAGCCGCCTCTGGTCAATGGAGAGTCAAGACGAAGCTTCATGGTCGTTCCCGTCGGAG
TTATCAGCTAGGAACGGGGAGAGCTGAGAAAGAGTGAAGACAAGGACTGGAGCTAAGGGTCACCGGAGAACACGGCGGCGGCAGTTTGATAACG
ATCTCATTGTCGGTTATCTAGGGCTTCTTTGGTTTTTCGGTTTAATTGTCTGGGTTCTTCTTTTATCTGATTGTATCTGCTTACCATTAACCAT
TCCCGGTTTGGACAAATTAATAATACTAATTTGTTTTT |
Primers for UN09100 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
GAGCTTCGGTGTGGCTCTAC |
60.02 |
20 |
CGACGTCGTACCTGTCTTGA |
59.897 |
20 |
199 |
197 |
395 |
2 |
CTCTACCTCATCTCGTCGCC |
59.973 |
20 |
CGACGTCGTACCTGTCTTGA |
59.897 |
20 |
185 |
211 |
395 |
3 |
GGCTCTACCTCATCTCGTCG |
59.973 |
20 |
CGACGTCGTACCTGTCTTGA |
59.897 |
20 |
187 |
209 |
395 |
|
|