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Simple sequence repeat (SSR)
>UN09116
GGGAACCACCATCCCACACAGAGAGTTTGGTCATTTTGTACTACTGTAGAAGGGGGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAGGGATGGCGTGGAGAGGAAACATAGCGAAGTCTCTGAAAGAGCTCAGGATTCTCCTCTGTCAATCTTCCCCAGCTAGCGCTTCCAC
CAGGACGTTCGTAGAGAAGAATTACAAAGATTTGAAGTCACTGAACCCTAAATTCCCTTTCCTGATCCGCGAATGCAGTGGGATCCAGCCTCAG
ATGTGGGCCAGATATGATATGGGTGTGGAGAGGTGTGTGAACTTGGATGGTATGAACGAGTCACAGATTCTCAAGTCTCTTGAAGACCTTGTCA
AAGCCGGAGGAGCTACAAAAGCCTAAAAGGTTGTTCCCTAAAAAAAAAGAATCTTAGATGATCCCGAATAAGATACAAACTTGAAACACATTCA
TCTGATCTGACTGTTCTTGTTATTCTATTACTTTGCAATTGCAACTAGTTGGTGTCGTATCGCCTTTCGTTTTTGTTTGTAATCCTTGGAACTT
GTTATTAAATGAACCTTCCGTATGATTGTTGAAAACATATTTAGTGTGTGGTTTGTGATGTGTTTCCCAATACAACACTCTTGATTTCTCAATT
CTAACTAAAATCTCTATTCAATGAGAG |
Primers for UN09116 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
AACCACCATCCCACACAGAG |
60.84 |
20 |
GCTATGTTTCCTCTCCACGC |
59.843 |
20 |
125 |
4 |
128 |
2 |
AACCACCATCCCACACAGAG |
60.84 |
20 |
GCTGGGGAAGATTGACAGAG |
59.803 |
20 |
173 |
4 |
176 |
3 |
AACCACCATCCCACACAGAG |
60.84 |
20 |
AGCTGGGGAAGATTGACAGA |
59.803 |
20 |
174 |
4 |
177 |
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