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Simple sequence repeat (SSR)
>UN09148
GGCCATCCCCAAATCCCGTTCTGCGTCACGGTGGCGCTTTATTCTCACGGCGGAGCGCCTCACCGGTTGCAGACGGTGTCGTGATTCCCTAACC
TCACATCATCATCATCCTTTAGCTGAAGATGGGGCAGAGCATGAGCTTGGAGTGAGACTGGAGCACCAGGGTATCTTCGCCTCCGTTCAGTGCG
GAGACATCGCCACTGTTCGGAGAGCCATGTCCACGGATCCGAGTCTTCTGAACCAAACCACTCCTTACGATCGCCACTCCCTCCTCCACGTCGC
TGCCGCCAGTGGTCAGATCGAGATCTTGTGTTTACTGTTGGAGAGATTTGCGAATCCAGATTTGTTGAATCGTCACAAGCAGACACCGTTGATG
TTGGCTGCGATGTACGGGAGGATCTCTTGCGTCAAGAAGCTTGCTCAAGTCGGAGCTAATGTTCTGATGTTTGATTCCGCCAATCGAAGAACAT
GTTTGCACTACGCAGCTTACTACGGACATGCTGATTGTCTTCTAACCGTTCTCTCTGCTGCTCAGTCAAGCCCCGTTGCTGTTCATTGGGGATA
TGCGAGATTTGTGAATACCAGGGATGACAAAGGAGCAACAGCCTTGCATCTAGCTGCTAGGCAGAGACGTCCTGATTGTGTTAATGTTCTCTTA
GACAGTGGCTCTCTTGTTTGTGCTTCCACTAGCCTTTACGGCTCTCCAGGGAGCACACCTCTTCATTTGGCTGCAAGAAGCGGATCTATCGATT
GCGTCAGAAAGTTACTTGCTTGGGGTGCTGATCGTCTTCAGAGAGACGCTTCTGGGAGGATACCATATGTGGTTGCGATGAAACACAAGCACGG
AGCATGTGGGGCGTTGCTTAACCCCTCTTCTGCTGAGCCTCTTGTCTGGCCATCCCCGTTAAAGTTCATCAGCGAGCTTAACGAGGAGGCGAAA
CTTCTCTTGGAGCAGGCTCTGATGGATGCTAACAGGGAGAGAGAGAAAACCATCCTCAAGGGAACTGCTTTCTCTTTACCGTCACCATCTTACT
CCGACACTGCCTCGGATGATAACATGTCTGAGATGAGTGATTCGGAGCTGTGCTGCATTTGCTTTGAGCAAGCATGCACGATTGAAGTCAAAGA
CTGTGGTCACCAAATGTGTGCACAATGCACTCTTGCACTGTGCTGTCACAACAAACCGAACCCAACTACTTCAACCGTGACTCCACCTGTCTGT
CCATTCTGTAGAAGTGTTATCTCACGGTTAGTAATCGCCCAGAACAACAACAACAACGACGACAGTAGCAAGAGCCAGAGCCAGGGCCAAGACG
AAGTTGTTGATCGTGAGGCAGTTGATGTCAGCTCTTCAAAACTCAGAAAGCATAGAAAATCGGTAAACCTTGGAGAAGAGAGCAGCAGTTTCAT
GGGACTATCAAGCATTGGATCGTTCGGGAAGATAACCGGCCGTGGCTCGGGAAGGATCGCAGCCGACAACGAGCTGATGGACAAACCGATTCTG
TGAGAATGTAATGAAATCAAATGATTGAAATAAGGAAAAGAAGAAGTGAGTTTATGTAATGAGATCAATGATTTGTTGTTTCTTTTGATCAATT
TGAAAAATGTTTTGTTGTCATT |
Primers for UN09148 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
ACTTCAACCGTGACTCCACC |
60.009 |
20 |
AGTCCCATGAAACTGCTGCT |
59.874 |
20 |
221 |
1196 |
1416 |
2 |
ACTTCAACCGTGACTCCACC |
60.009 |
20 |
TCAACTGCCTCACGATCAAC |
59.837 |
20 |
146 |
1196 |
1341 |
3 |
CTTCAACCGTGACTCCACCT |
60.151 |
20 |
AGTCCCATGAAACTGCTGCT |
59.874 |
20 |
220 |
1197 |
1416 |
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