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Simple sequence repeat (SSR)
>UN09169
GAACCAAAAAGCTTTGTTGATGAATTCAATCATTCGCAAATGTAAGGCTTTATTTAAAAGCTTGTTTCAAGAGTTGTGAAAAAAACAAAAAAAA
AAAGGAAAAGAGAAAAGAGAAAAGTCTCTCTTTTGATGTTATTGGAATAGGTTCGAAAGGCGGAAGCACTGGCGCAATGGTTTTCCATAAACAC
AAGTGATCACCGCCTGTGTTGTTGGACGAACTTTGAGTTCTTGGCGTCTTCCTCAGTGAATCCAGCGGTGAGCTTGGTGATGAGGACGCCGGTT
ACGGCGAAACCGGTGAGAAACGGCCAGCAACGTTTCCATTCCCTCTTGAAGAACACTGGCCATGGATCGAACAACCTCATTTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTAGGAGTGCCATGAATTTGAGCGTGAACAGATGCATCGCCGGTGGATCTTTCAGTTGCAGAATCAATAA
TGGTGCTGAAAAAAGGTTGGTCCGTGTTGCCAAGCACTGTGAGCTTCAGAGAGGGAGAAGTTTAGGGTCTGATGCTCTCTCTTTAGAGAAGAAA
GAGAGCACAAGTGCTAAACTTGCTATGTTTGGTAGTGGTTTAGTAGGAGTGGCAAACTTGGTAACTCTTAGCTCAGCAAAGGCCGCAGACTTGA
AATTGGTTGTCTTGGATCAAGCCACTTCCGTTTACATCTTGGCTGAAGGGACGCTGGGAGACTCGCTTGGAAACTTCTTGTATTCGGCTAACCA
ACAAGCTAATGAAGCTGTTCAGGATCAGCTCTCAGCTCTCAGTGTAACAAGTTTGGCAGTCATATTTGGGGCTGGACTTGTGACAAGTCTTTCT
CCATGTACACTCAGTGTTCTGCCTTTGACCCTTGGTTATATTGGTGCGTTTGGATCTGGCAAAAGCAGAGGTCAGGTTATTGGAGATGCAATTG
CTTTCTCACTGGGACTAGCAACTACCTTAGCACTTCTTGGGATAGTAGCCTCTTTTGCCGGAAAAGCATATGGACAAATAGGACAGGGACTACC
AGTAGCTGCATCAGGTCTGGCTATTGTAATGGGTCTCAATCTCCTTGAGGTGATCCAACTCCAGCTTCCATCTTTCTTTGACAACTTTGATCCT
CGCGCAGCAGCAGCAAACTTCCCATCTAGTGTACAAGCGTATCTAGCGGGTCTCACCTTCGCATTAGCTGCCTCACCTTGTAGTACTCCAGTTC
TAGCCACCCTTCTTGGCTATGTGGCTACTTCCAAGGATCCAGTAATAGGTGGAAGCTTACTATTGACGTATACAACAGGTTACGTTGCTCCACT
CATCCTCGCTGCTTCTTTCGCAGGAGCTTTACAGAGCTTACTCTCGTTTCGAAAAGTCTCTGCATGGATCAATCCCATAAGTGGTGCTCTTCTA
CTTGGAGGAGGTTTGTATACTTTCTTGGATAGGCTTTTCCCTGCTGCCACTATGGTCATGTAAATATTTGTTACTAAGAAGAATCACATACTCA
TTTCTACCCAAAAGAAAACAACAAAGGGTGTGTGTATAGTATTATAAAACATTCATATTGATTAATAATGTAAAATCTTAAAAACAAGCAAACA
ATAGAATCGATCACTACTCACCG |
Primers for UN09169 SSR
Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
1 |
TGAGTTCTTGGCGTCTTCCT |
59.989 |
20 |
CAACACGGACCAACCTTTTT |
59.869 |
20 |
278 |
222 |
499 |
2 |
TTCTTGGCGTCTTCCTCAGT |
59.989 |
20 |
CAACACGGACCAACCTTTTT |
59.869 |
20 |
274 |
226 |
499 |
3 |
AGTTCTTGGCGTCTTCCTCA |
59.989 |
20 |
CAACACGGACCAACCTTTTT |
59.869 |
20 |
276 |
224 |
499 |
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