 |
Simple sequence repeat (SSR)
>UN09208
AAGAAAAAGAGTATCCAAAATGACCAAACACTCACCACTCTCACTTTCAACATCAATCTTTCTCATCGTTGCTCTTTTTACTGCAACAGCCGCA
CTCGACCCTGCTCCCGAAGACCCGATTTTCGAACTGTACATGCATGATATACTTGGCGGAAGCAGTCCAACGGCAAGACCCATCACCGGTTTGC
TTGGAAACATCTACAACGGTCAAGTACCTTTTGCTAAGCAGATCGGTTTTGTTCCGCCAGCAAACGGTGTAGCCATTCCAAATGCAAACGGCGC
AATGCCAACGGTCAACGGTATCAACGGTATTCCTCTAGGTACCGGTTTATCCGGTACAGCTTTTTCAGGTCAGAATCTAAATGGGATTCAGACA
CAACTGGGACCTGATGGTCTGAGTCTTGGCTTTGGGACGATCACGGTGATTGACGACATAATCACATCCGGTCCTGACTTGGGTTCTCAGCCGC
TTGGTAAAGCTCAGGGGGTGTATGTTGCAAGCTCAGCAGATGGAAGCACACAGATGATGGCTTTCACAGCTATGCTTGAAGGTGGAGAGTACAA
TGATAATCTCAATTTCTATGGAATTTACAGAATCGGAAGCGCCATGTCGCATCTGTCTGTGACTGGAGGAACCGGAAGGTTCAAGAACGCTTGT
GGGTTTGCAGAGGTAAGGCCGTTGATTCCTGCAGGTCAACACTTTGTTGATGGTGCAGAGATGCTGTTGAGGATCATTGTCCATCTTAAGTACT
GAGAACTTGTATATGAAATGTGTGATTCCCTTTGTGAGTTAAAAAATGTTTTCTAGTATTTGAACAATGTAAAAGAAACATTGTATTTTATATG
ATTTGATACAACAAACATCATATCCTGAACCATTTATAGGAATTGGAGACCAACAGTACAATAGGAAGGGTTTTGAATTTATTGCTTACATGCT
TATGGTCCAACAAAGAACTAAGCATAAGAATACTGTTTGGTCAGCCGCTACTTCTTCTCCTATAGGGCCATGAGTTTACTCAGAACACTCCGAA
GAATGTAGCTGCAGCAAAGACTAAGAAGAGAGCTCCACCAACGTATCCCACCACTTTCTCGGAGATATAGTTGGCTAAAAACGCGCCGCCCATG
ATTGCAAGCAATGTTGCCACTAAGTGTCCAGCAATAGCACCACTCGCAACTCCCCATGGTGACTGTGCAGCCCCAAGCGCAACAGTTGCAAGCA
TTGACCGATCTCCCCATTCAGCAAAGAAAACAAGGCTGAATGATTTCCAGAGGATTTCAAGTGGGTTTGTCAACTTTTTAGACGCCTTTTCTTT
AACGAGTTCCTCAGCTTCAGTGTATTCACCGAGTTCTATACCACTCTCCTCACCATTCTTGGCTTCAGCTTGTGGAAGATCCCATGCATCCTTG
ATGGATTTCAATCCAAAGAACATGAGAAGCGCAATTGCAGCATATTCTCCTATCGGTACAGTTGTCTGGAACTGAGCAGGCACGGATTGAAAAA
CCTTCCCGATAACAACCGATAAGACAGTCATCAACGATAAAGCTCCCATTGAACCTAAAAGGACCAATATTCTCGTATTGCATAGCCAACAAAG
CAGCAATAAAAAATGTCTTGTCACCAATCTCAGAAACGAAGATCAGTGAGAAGGCTGCGGTGAAGCCTGATTTTGCTACTGCTGCTAGAACTGA
GGATGGTCCTCCCTTGACAAAAGTGATTAGAGAGAATACCAAACCGCAACTCAGTAGTACAAGTACTATCGATAATGAGTAAGGGAATGGCCCT
TGAGGTTTTAAGCTTTCTTGTGAAGACTGATCAAGAGAACTACTTTGAGATCCATCCTCCTCACTCCCAGATCCAACACCAGCATTTGATGCAT
GAACTCTAAATCTTCCACAAAGCAAATCCGGTCTTGATCTCCATCTACATCTTAAAGGAGGAGACGCTGGTTTTCTAGAACTCTTTGGGCAAGG
CAACGATTCAGACACGGATAGAAACGGGAGTTTCCGTACTGAATATACAGATGCTGATGCTGTGGAGTTAGCACTATTGCTAAAGCTTGTAACA
CTCATTGTTCTTTAACTATGGACCCACGGAAGCAGAGGGTTTAGTGAATCATTGCTTTTGTTTGATAAACAAGAAACCCAGAAAGAAAGAAAGA
AAGAAAGAAAGATGGAGACTTTCTTCGGATTCTACTCTGCAGAGAGAATTGGGTTAGTGATGATGGAGATAGATAGGATTGTGCAATTCGAGCC
GCTTTGTCTGTGCGGTTGGGATTTGACTTCGATCC |
Primers for UN09208 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
CGGAAGCAGAGGGTTTAGTG |
59.869 |
20 |
GGATCGAAGTCAAATCCCAA |
59.871 |
20 |
197 |
2095 |
2291 |
| 2 |
CACGGAAGCAGAGGGTTTAG |
59.869 |
20 |
GGATCGAAGTCAAATCCCAA |
59.871 |
20 |
199 |
2093 |
2291 |
| 3 |
ACAGATGCTGATGCTGTGGA |
60.436 |
20 |
GGATCGAAGTCAAATCCCAA |
59.871 |
20 |
271 |
2021 |
2291 |
|
|
