 |
Simple sequence repeat (SSR)
>UN09354
ACCCTTAATAAACACTTACTATTATTTATGTTCAACAATAAACATGTTTACCCATTTGAAACTCTAACAAGCAAAGACATCCTCGAGATTTATG
TTCTCTAGTAACAAGGTTGATTTATAAAACCAAGTGAAGCATACATGATCCATTGTACTGTATAACAAGCAAATCATCACTCGCCTCTCAATTG
GGCTTCACGGCTAGTTAAAGGAACATAACGAACTGATGTTTCGCTCCTGATGCTAACCGAACCATCAGAGTTCTTATCCACCACTTGCAGATCT
TGGAATAAGTTGCCAACCGGGATCACCAGTCTCCCACCAGGTTTCAATTGATCAATCAATGCCTCTGGGATCTCCGGTGCCGCTGCTCCCACAT
GAATAGCATCATAAGGTGCAAACTCACCCCATCCTTGCCTTCCATCTCCAACATGAATAGCCAGAGATCCTTGTTTCAGCAATGGCGAAGCAGC
AGCACTCGCTTCAATGTTCTTGATGGAAGAAGCCACCAATTCAGGGATGTGCTCCACACCAATAGCACGACCTTCGGAACCAACCATAAACGCA
AAGCAAGCTGTTAAGTACCCGGTTCCAGAGCCGACATCAAGAACACGCATCCCTGGTTTCAGATTCTTTTCGAGGAGCTCAAGGCACATTGCGT
GCATGTGAGGAGCTGATATGGTGACGTTGTAGCCAATAGACAAGGGACTGTCGACGTAAGCATAGGAACGGTCTGGTACAAAGAGGCCTCTGTC
GACAGCCTCCATAGCTTTAGCGACCTCGTCAGAGGTAATCACACCATGGCTTTGAAGATTCTCCACCATAGCTTTGTTCTTGTTGATACTGTTT
GGGCTCCAGAATTGCTTCATGTTGTGTGAGAGATAACTTCCCGTGACTGGACACTTTGAGAAAGAGTCCGAGAGAGAGAGAGGTGATCGGAGAC
TTTATTCGTTTAGGATAATGCGCATGATAGCGGAAACTGCACGCAACAAAAAGGGAATATCGTGCGCGTGCTTTTGCACAGATGCCCGATATTT
TGTGTTATGTTTCAGTATTTTCCCCTAAGTTTGGTTTTTAATCATTCTGACCCCCAAATGTCTGTTCTACAAGTTTGCAAAACGACGTCGTTGT
GGAGGTTTAGGACGACAAAACAAAACCCCTTCGGATCTGTTGTCGGCTTCGCTCGTCACTTTCATCATTTCTAGGTTTTTCTTTTCCAATCTGA
AATGGCGAATCTTGTGCACAGATTTCTGAGGAACCAATCCTGTTTAAGAGCGATCCCGAGGCTCACTCCCAGTCTTCTTACACCACATCAGAAG
CCTTGCGTCGTCGTCGAGTCTGCATCTGTGGAGTCCGATCCAGTTTCGCTTGCTAATAATCCCGTGATTACCGTCTCCTCTTCGTTTAATAAAC
CCGACGAATCTCTGCGGTTTTACCCTAGTTTCCCAATCGGGTACGGATTTAACCCGACTATGGTTCACGGTTCGGATCTAATCGGTATGGTGCC
GTCGTTCACGGAGGAGGCGGTGGTGGAGGAGAAAGGTGAGAAGGAGGTGGTGATTTACGCTGATAGTGTGAAGAAGAAGCGGAAGAAGAAGATG
AACAAGCATAAGTACAGGAAGCTCAGGAAGGCTCAAGGTCGCAAATCTTAAAGAGCTTCTTTGCTTCGATTCCTCCCTTTCTCCAAACATATTT
GTTTGAATTAGATCGGTAATGCTACAAAGTATTGTTTTCTGCATTTCCCGTTAAAGTGAGTTCACTCATTTCCACACAGTTGCTGTGTTGTAGC
TTCAATGATTTGAATCTTCAGGACTTGAAAATTGTGTTTCAAAGTTGATGGAGACAAGTGAGTTTGCTTGCTTCAAAGTTCCTGTCTTTTTCTT
TCTTGCATCGTCTCCTAGTATTGGTTTGTCTTTACCTAATCAGAAATCCTGAGATTTATATTGGTCTTTTAGTTTGTGATCGTAGTCACTTTTC
TGGGTTGCTTTGGAGACCTAATATTATCTAGTCTGATTGTTTTCAACT |
Primers for UN09354 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
AGCGACCTCGTCAGAGGTAA |
60.012 |
20 |
AAAATATCGGGCATCTGTGC |
59.929 |
20 |
265 |
771 |
1035 |
| 2 |
AGCGACCTCGTCAGAGGTAA |
60.012 |
20 |
TTTTTGTTGCGTGCAGTTTC |
59.895 |
20 |
222 |
771 |
992 |
| 3 |
CTTCCCGTGACTGGACACTT |
60.151 |
20 |
AAAATATCGGGCATCTGTGC |
59.929 |
20 |
153 |
883 |
1035 |
|
|
