 |
Simple sequence repeat (SSR)
>UN09393
AAAATAAGAGGCTCATTATATTATCCACACACAGCAATAAACAACTCTTATTATTTTTCCTTAGTTGCAACACACCTCACGAAGAAACGTACGC
AGGAAAATATATGATCAAACCGAGTCGATACAACTTCTCGTAAAAACGGAAACGGCAAAGATGGTAAATAAAGACTTAACAGAGTGTGATTAAG
TTTACAAGACATGCATACCATTACCAAAGCAATCATTCTCCACATGCATATTATAGATTCAAGATCTCTCTTTATTGCAGGCCAAGTTTATTAT
AGATCGTGTTTCTTTAGAAGTAAGAGAAAGAGAGAGAGAGCTCTCTACGCAGAGGCGTTAACGGCTTTGTTCACGAAATTATCAACATATTCTT
TCCTTGCAGGAAGATGGTCGTGTGGACGATTGTATGGTGTCCACACCGGTTCACCCACGAAAAGACGCATTGCCTTGATATAGTTGTCAGAATC
CACAGTGAAGCGATGATAAATTCCAGCAGGCAAGACTATCATTCCTCCCTTCTTCACCCAAACTCTGATCCAAGCTTCGTTGCGGTCCCTCACA
TCAAAGTAGCCACTTCCTGCAACGCAGTAACGGATCTCTTCATCAGTGTGAAGATGTTCCTCGAAAAAACTCTTTACTTTCTCTTCATAATTCT
GAAGCTTCTCAGGGCATACCTCACAGAAGTCCATGTAGGAGTAACCACGAGAGTCGCGGATCTTTTTCAACTCCTCATCAGTTTCGTAGTGATC
AGCATCAAGTCTCCAGCTAAGGACCCCAAGCTCTGCAAGTTTGTCGAGAGAGATGAACTCTTTAGGATCCTTGTGGTGAGGAAGTCGCTGATCC
TCTTGGCTATCATCCATGTACCATGCCTGAATCACTTCTTCTCTTCCATCCTTCACGGCTTCACCCATCGTCGTCTTCGTTATGCGTTTGTTCC
CCTTCCTCGTCTCGTCAAAACCACGCGAATAGAATCC |
Primers for UN09393 SSR
| Primer pair | Forward primer (5'-3') |
Reverse primer (5'-3') | Product |
|---|
| Sequence | Temperature | Size | Sequence | Temperature |
Size | Size | Start | End |
|---|
| 1 |
GTAAAAACGGAAACGGCAAA |
59.979 |
20 |
GTCCACACGACCATCTTCCT |
59.969 |
20 |
270 |
134 |
403 |
| 2 |
GGAAACGGCAAAGATGGTAA |
59.938 |
20 |
GTCCACACGACCATCTTCCT |
59.969 |
20 |
262 |
142 |
403 |
| 3 |
TAAAAACGGAAACGGCAAAG |
60.102 |
20 |
GTCCACACGACCATCTTCCT |
59.969 |
20 |
269 |
135 |
403 |
|
|
